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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11161 O_BomoIG16283_complete:A_BomoIG_DN32693_c1_g2_i29
364bp
 b(0,+)-type_amino_acid_transporter_1_isoform_X2_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
11162 O_BomoIG16284_complete:A_BomoIG_DN32693_c1_g2_i29
236bp
 b(0,+)-type_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
11163 O_BomoIG16285_complete:A_BomoIG_DN32693_c1_g2_i29
123bp
11164 O_BomoIG16286_complete:A_BomoIG_DN32693_c1_g2_i30
228bp
 b(0,+)-type_amino_acid_transporter_1_isoform_X2_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
11165 O_BomoIG16287_complete:A_BomoIG_DN32693_c1_g2_i30
187bp
 b(0,+)-type_amino_acid_transporter_1_isoform_X2_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
GO:0050900 P leukocyte migration
11166 O_BomoIG16288_complete:A_BomoIG_DN32693_c1_g2_i30
101bp
11167 O_BomoIG16289_complete:A_BomoIG_DN32693_c1_g2_i31
128bp
 b(0,+)-type_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015804 P neutral amino acid transport
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0031526 C brush border membrane
GO:0042605 F peptide antigen binding
11168 O_BomoIG1628_5prime_partial:A_BomoIG_DN30244_c4_g5_i3
386bp
 uncharacterized_protein_LOC101736849_isoform_X1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11169 O_BomoIG16290_complete:A_BomoIG_DN32653_c0_g1_i1
954bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11170 O_BomoIG16291_complete:A_BomoIG_DN32653_c0_g1_i1
149bp
11171 O_BomoIG16292_3prime_partial:A_BomoIG_DN32653_c0_g1_i2
248bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11172 O_BomoIG16293_complete:A_BomoIG_DN32653_c0_g1_i2
149bp
11173 O_BomoIG16294_complete:A_BomoIG_DN32653_c0_g1_i3
413bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11174 O_BomoIG16295_complete:A_BomoIG_DN32653_c0_g1_i3
149bp
11175 O_BomoIG16296_complete:A_BomoIG_DN32653_c0_g1_i6
639bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11176 O_BomoIG16297_5prime_partial:A_BomoIG_DN32653_c0_g1_i9
520bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11177 O_BomoIG16298_complete:A_BomoIG_DN32653_c0_g1_i9
149bp
11178 O_BomoIG16299_complete:A_BomoIG_DN32653_c0_g1_i10
592bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11179 O_BomoIG1629_complete:A_BomoIG_DN30244_c4_g3_i3
296bp
 lipoyl_synthase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0009107 P lipoate biosynthetic process
GO:0016740 F transferase activity
GO:0016992 F lipoate synthase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
11180 O_BomoIG162_5prime_partial:A_BomoIG_DN30242_c5_g3_i2
114bp
 uncharacterized_protein_LOC101736984_isoform_X2_[Bombyx_mori]
11181 O_BomoIG16300_complete:A_BomoIG_DN32653_c0_g1_i10
149bp
11182 O_BomoIG16301_complete:A_BomoIG_DN32653_c0_g1_i14
599bp
 DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000729 P DNA double-strand break processing
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017108 F 5'-flap endonuclease activity
GO:0032508 P DNA duplex unwinding
GO:0033567 P DNA replication, Okazaki fragment processing
GO:0043139 F 5'-3' DNA helicase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11183 O_BomoIG16302_3prime_partial:A_BomoIG_DN32676_c0_g1_i1
2167bp
 LOW_QUALITY_PROTEIN:_serine/threonine-protein_kinase_WNK1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006468 P protein phosphorylation
GO:0010765 P positive regulation of sodium ion transport
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019869 F chloride channel inhibitor activity
GO:0032414 P positive regulation of ion transmembrane transporter activity
GO:0035556 P intracellular signal transduction
GO:0043066 P negative regulation of apoptotic process
GO:0046777 P protein autophosphorylation
GO:0051928 P positive regulation of calcium ion transport
GO:0090004 P positive regulation of protein localization to plasma membrane
GO:0090188 P negative regulation of pancreatic juice secretion
GO:2000021 P ion homeostasis
GO:2000651 P positive regulation of sodium ion transmembrane transporter activity
GO:2000682 P obsolete positive regulation of rubidium ion transport
GO:2000688 P obsolete positive regulation of rubidium ion transmembrane transporter activity
11184 O_BomoIG16303_complete:A_BomoIG_DN32676_c0_g1_i1
158bp
11185 O_BomoIG16304_complete:A_BomoIG_DN32676_c0_g1_i1
135bp
11186 O_BomoIG16305_3prime_partial:A_BomoIG_DN32676_c0_g1_i2
2187bp
 LOW_QUALITY_PROTEIN:_serine/threonine-protein_kinase_WNK1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006468 P protein phosphorylation
GO:0010765 P positive regulation of sodium ion transport
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019869 F chloride channel inhibitor activity
GO:0032414 P positive regulation of ion transmembrane transporter activity
GO:0035556 P intracellular signal transduction
GO:0043066 P negative regulation of apoptotic process
GO:0046777 P protein autophosphorylation
GO:0051928 P positive regulation of calcium ion transport
GO:0090004 P positive regulation of protein localization to plasma membrane
GO:0090188 P negative regulation of pancreatic juice secretion
GO:2000021 P ion homeostasis
GO:2000651 P positive regulation of sodium ion transmembrane transporter activity
GO:2000682 P obsolete positive regulation of rubidium ion transport
GO:2000688 P obsolete positive regulation of rubidium ion transmembrane transporter activity
11187 O_BomoIG16306_complete:A_BomoIG_DN32676_c0_g1_i2
158bp
11188 O_BomoIG16307_complete:A_BomoIG_DN32676_c0_g1_i2
135bp
11189 O_BomoIG16308_5prime_partial:A_BomoIG_DN32676_c0_g1_i2
106bp
11190 O_BomoIG16309_3prime_partial:A_BomoIG_DN32676_c0_g1_i3
359bp
 uncharacterized_protein_LOC110384772_[Bombyx_mori]
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