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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10771 O_BomoIG15932_complete:A_BomoIG_DN32625_c3_g2_i1
304bp
 innexin_3_[Bombyx_mori]
GO:0005243 F gap junction channel activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005921 C gap junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0010496 P intercellular transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0055085 P transmembrane transport
10772 O_BomoIG15933_complete:A_BomoIG_DN32625_c3_g2_i2
386bp
 innexin_3_[Bombyx_mori]
GO:0005243 F gap junction channel activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005921 C gap junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0010496 P intercellular transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0055085 P transmembrane transport
10773 O_BomoIG15934_complete:A_BomoIG_DN32625_c3_g2_i4
386bp
 innexin_3_[Bombyx_mori]
GO:0005243 F gap junction channel activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005921 C gap junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0010496 P intercellular transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0055085 P transmembrane transport
10774 O_BomoIG15935_complete:A_BomoIG_DN32625_c3_g2_i5
237bp
 innexin_3_[Bombyx_mori]
GO:0005243 F gap junction channel activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005921 C gap junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0010496 P intercellular transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0055085 P transmembrane transport
10775 O_BomoIG15936_complete:A_BomoIG_DN32625_c3_g1_i2
110bp
 mitochondrial_ribosomal_protein_S25_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
10776 O_BomoIG15937_complete:A_BomoIG_DN32625_c3_g1_i3
168bp
 mitochondrial_ribosomal_protein_S25_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
10777 O_BomoIG15938_complete:A_BomoIG_DN32625_c3_g2_i6
237bp
 innexin_3_[Bombyx_mori]
GO:0005243 F gap junction channel activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005921 C gap junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0010496 P intercellular transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0055085 P transmembrane transport
10778 O_BomoIG15939_complete:A_BomoIG_DN32654_c2_g2_i1
415bp
 bromodomain_adjacent_to_zinc_finger_domain_protein_2B_isoform_X7_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10779 O_BomoIG1593_complete:A_BomoIG_DN30226_c1_g2_i4
155bp
 ubiquitin-conjugating_enzyme_E2_W_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
10780 O_BomoIG15940_complete:A_BomoIG_DN32654_c2_g2_i1
218bp
10781 O_BomoIG15941_3prime_partial:A_BomoIG_DN32654_c2_g1_i2
185bp
 centromere_protein_I_[Bombyx_mori]
10782 O_BomoIG15942_complete:A_BomoIG_DN32654_c2_g6_i1
331bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10783 O_BomoIG15943_complete:A_BomoIG_DN32654_c2_g6_i1
165bp
10784 O_BomoIG15944_internal:A_BomoIG_DN32654_c2_g2_i2
393bp
 uncharacterized_protein_LOC101745407_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10785 O_BomoIG15945_complete:A_BomoIG_DN32654_c2_g2_i2
122bp
10786 O_BomoIG15946_3prime_partial:A_BomoIG_DN32654_c2_g2_i2
108bp
10787 O_BomoIG15947_complete:A_BomoIG_DN32654_c2_g2_i3
352bp
 uncharacterized_protein_LOC101745407_isoform_X6_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10788 O_BomoIG15948_complete:A_BomoIG_DN32654_c2_g2_i3
218bp
10789 O_BomoIG15949_3prime_partial:A_BomoIG_DN32654_c2_g1_i4
185bp
 centromere_protein_I_[Bombyx_mori]
10790 O_BomoIG1594_complete:A_BomoIG_DN30226_c1_g2_i9
173bp
 ubiquitin-conjugating_enzyme_E2_W_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
10791 O_BomoIG15950_complete:A_BomoIG_DN32654_c2_g6_i2
412bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10792 O_BomoIG15951_complete:A_BomoIG_DN32654_c2_g6_i2
165bp
10793 O_BomoIG15952_complete:A_BomoIG_DN32654_c2_g6_i3
412bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10794 O_BomoIG15953_complete:A_BomoIG_DN32654_c2_g6_i3
165bp
10795 O_BomoIG15954_complete:A_BomoIG_DN32654_c2_g2_i4
152bp
10796 O_BomoIG15955_5prime_partial:A_BomoIG_DN32654_c2_g2_i5
443bp
 uncharacterized_protein_LOC101745407_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10797 O_BomoIG15956_complete:A_BomoIG_DN32654_c2_g2_i5
218bp
10798 O_BomoIG15957_3prime_partial:A_BomoIG_DN32654_c2_g2_i5
108bp
10799 O_BomoIG15958_3prime_partial:A_BomoIG_DN32654_c2_g1_i5
294bp
 centromere_protein_I_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0034508 P centromere complex assembly
10800 O_BomoIG15959_complete:A_BomoIG_DN32654_c2_g2_i6
352bp
 bromodomain_adjacent_to_zinc_finger_domain_protein_2B_isoform_X8_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
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