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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10501 O_BomoIG1568_complete:A_BomoIG_DN30279_c0_g2_i2
238bp
 uncharacterized_protein_LOC101741342_[Bombyx_mori]
10502 O_BomoIG15690_complete:A_BomoIG_DN32639_c2_g4_i1
110bp
10503 O_BomoIG15691_complete:A_BomoIG_DN32639_c2_g4_i2
135bp
 uncharacterized_protein_LOC101741044_isoform_X3_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10504 O_BomoIG15692_complete:A_BomoIG_DN32639_c2_g4_i2
110bp
10505 O_BomoIG15693_5prime_partial:A_BomoIG_DN32639_c2_g4_i3
226bp
 uncharacterized_protein_LOC101741044_isoform_X2_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10506 O_BomoIG15694_complete:A_BomoIG_DN32639_c2_g4_i3
131bp
10507 O_BomoIG15695_5prime_partial:A_BomoIG_DN32639_c2_g4_i4
140bp
 uncharacterized_protein_LOC101741044_isoform_X3_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10508 O_BomoIG15696_complete:A_BomoIG_DN32639_c2_g12_i2
250bp
 methyl-CpG-binding_domain_protein_3_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0000790 C chromatin
GO:0000792 C heterochromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001701 P in utero embryonic development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006346 P DNA methylation-dependent heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007568 P aging
GO:0008327 F methyl-CpG binding
GO:0009888 P tissue development
GO:0014070 P response to organic cyclic compound
GO:0016573 P histone acetylation
GO:0016575 P histone deacetylation
GO:0016581 C NuRD complex
GO:0031492 F nucleosomal DNA binding
GO:0031667 P response to nutrient levels
GO:0032355 P response to estradiol
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0044030 P regulation of DNA methylation
GO:0048568 P embryonic organ development
GO:1901796 P regulation of signal transduction by p53 class mediator
10509 O_BomoIG15697_3prime_partial:A_BomoIG_DN32639_c2_g4_i5
470bp
 uncharacterized_protein_LOC101741044_isoform_X2_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10510 O_BomoIG15698_5prime_partial:A_BomoIG_DN32639_c2_g4_i5
241bp
10511 O_BomoIG15699_complete:A_BomoIG_DN32639_c2_g4_i5
110bp
10512 O_BomoIG1569_complete:A_BomoIG_DN30279_c0_g2_i2
112bp
10513 O_BomoIG156_complete:A_BomoIG_DN30242_c4_g4_i1
131bp
 hypothetical_protein_1_-_cabbage_looper_transposon_TED_(fragment)
10514 O_BomoIG15700_5prime_partial:A_BomoIG_DN32639_c2_g4_i6
171bp
 uncharacterized_protein_LOC101741044_isoform_X2_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10515 O_BomoIG15701_complete:A_BomoIG_DN32639_c2_g4_i7
221bp
 uncharacterized_protein_LOC101741044_isoform_X2_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10516 O_BomoIG15702_complete:A_BomoIG_DN32639_c2_g4_i7
131bp
10517 O_BomoIG15703_complete:A_BomoIG_DN32639_c2_g4_i7
110bp
10518 O_BomoIG15704_complete:A_BomoIG_DN32639_c2_g12_i4
181bp
 methyl-CpG-binding_domain_protein_2_isoform_X2_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0000790 C chromatin
GO:0000792 C heterochromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006346 P DNA methylation-dependent heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008327 F methyl-CpG binding
GO:0019904 F protein domain specific binding
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031492 F nucleosomal DNA binding
GO:0035197 F siRNA binding
GO:0042127 P regulation of cell population proliferation
GO:0042711 P maternal behavior
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0043623 P protein-containing complex assembly
GO:0070742 F C2H2 zinc finger domain binding
10519 O_BomoIG15705_complete:A_BomoIG_DN32639_c2_g4_i9
244bp
 uncharacterized_protein_LOC101741044_isoform_X2_[Bombyx_mori]
GO:0001675 P acrosome assembly
GO:0005783 C endoplasmic reticulum
GO:0005801 C cis-Golgi network
GO:0007286 P spermatid development
GO:0007338 P single fertilization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070971 C endoplasmic reticulum exit site
GO:0097038 C perinuclear endoplasmic reticulum
10520 O_BomoIG15706_complete:A_BomoIG_DN32639_c2_g4_i9
110bp
10521 O_BomoIG15707_internal:A_BomoIG_DN32639_c2_g16_i1
149bp
10522 O_BomoIG15708_5prime_partial:A_BomoIG_DN32643_c4_g1_i1
290bp
 methuselah-like_protein_10_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10523 O_BomoIG15709_complete:A_BomoIG_DN32643_c4_g1_i3
218bp
 methuselah-like_protein_10_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10524 O_BomoIG1570_complete:A_BomoIG_DN30279_c0_g1_i4
443bp
 zinc_finger_protein_chinmo_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
10525 O_BomoIG15710_complete:A_BomoIG_DN32643_c4_g10_i1
1024bp
 abnormal_cell_migration_protein_10_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
10526 O_BomoIG15711_complete:A_BomoIG_DN32643_c4_g10_i1
116bp
10527 O_BomoIG15712_complete:A_BomoIG_DN32643_c4_g10_i1
106bp
10528 O_BomoIG15713_complete:A_BomoIG_DN32643_c4_g10_i2
1024bp
 abnormal_cell_migration_protein_10_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
10529 O_BomoIG15714_complete:A_BomoIG_DN32643_c4_g10_i2
116bp
10530 O_BomoIG15715_complete:A_BomoIG_DN32643_c4_g10_i2
106bp
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