SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/103968
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
931 O_BomoBR100839_5prime_partial:A_BomoBR_DN30701_c1_g1_i1
154bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
932 O_BomoBR10083_complete:A_BomoBR_DN31320_c0_g3_i11
106bp
933 O_BomoBR100840_complete:A_BomoBR_DN30701_c1_g2_i1
127bp
 chlorophyllide_A_binding_protein_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016787 F hydrolase activity
GO:0031409 F pigment binding
934 O_BomoBR100841_3prime_partial:A_BomoBR_DN30701_c1_g2_i2
300bp
 chlorophyllide_A_binding_protein_isoform_X2_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0005215 F transporter activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
935 O_BomoBR100842_3prime_partial:A_BomoBR_DN30701_c1_g2_i3
658bp
 chlorophyllide_A_binding_protein_isoform_X2_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0005215 F transporter activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
936 O_BomoBR100843_5prime_partial:A_BomoBR_DN30701_c1_g1_i2
414bp
 PREDICTED:_uncharacterized_protein_LOC106709669_[Papilio_machaon]
937 O_BomoBR100844_complete:A_BomoBR_DN30701_c1_g1_i2
101bp
938 O_BomoBR100845_internal:A_BomoBR_DN30701_c1_g1_i3
278bp
 PREDICTED:_uncharacterized_protein_LOC106709669_[Papilio_machaon]
939 O_BomoBR100846_complete:A_BomoBR_DN30701_c1_g1_i3
101bp
940 O_BomoBR100847_3prime_partial:A_BomoBR_DN30701_c1_g1_i4
925bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
941 O_BomoBR100848_complete:A_BomoBR_DN30701_c1_g1_i4
359bp
 Uncharacterized_protein_OBRU01_16391_[Operophtera_brumata]
942 O_BomoBR100849_complete:A_BomoBR_DN30701_c1_g1_i4
132bp
943 O_BomoBR10084_complete:A_BomoBR_DN31320_c0_g3_i12
690bp
 SCY1-like_protein_2_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0004672 F protein kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000286 P receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
944 O_BomoBR100850_complete:A_BomoBR_DN30701_c1_g1_i4
101bp
945 O_BomoBR100851_internal:A_BomoBR_DN30701_c1_g1_i5
269bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
946 O_BomoBR100852_3prime_partial:A_BomoBR_DN30701_c1_g2_i5
260bp
 chlorophyllide_A_binding_protein_isoform_X2_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0005215 F transporter activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
947 O_BomoBR100853_internal:A_BomoBR_DN30701_c1_g2_i6
1514bp
 chlorophyllide_A_binding_protein_isoform_X1_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0005215 F transporter activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
948 O_BomoBR100854_5prime_partial:A_BomoBR_DN30701_c1_g2_i7
1804bp
 chlorophyllide_A_binding_protein_isoform_X1_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0005215 F transporter activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
949 O_BomoBR100855_complete:A_BomoBR_DN30701_c1_g2_i7
126bp
950 O_BomoBR100856_complete:A_BomoBR_DN30701_c1_g2_i8
125bp
 chlorophyllide_A_binding_protein_isoform_X1_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0005215 F transporter activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0070062 C extracellular exosome
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
951 O_BomoBR100857_5prime_partial:A_BomoBR_DN30799_c2_g1_i1
263bp
 uncharacterized_protein_LOC101746616_[Bombyx_mori]
952 O_BomoBR100858_complete:A_BomoBR_DN30799_c2_g5_i1
239bp
 uncharacterized_protein_LOC101746471_[Bombyx_mori]
953 O_BomoBR100859_3prime_partial:A_BomoBR_DN30799_c2_g2_i2
172bp
 uncharacterized_protein_LOC110374039_[Helicoverpa_armigera]
954 O_BomoBR10085_complete:A_BomoBR_DN31320_c0_g3_i12
112bp
955 O_BomoBR100860_5prime_partial:A_BomoBR_DN30799_c2_g7_i1
106bp
 PREDICTED:_MOB_kinase_activator_1A_[Jaculus_jaculus]
956 O_BomoBR100861_3prime_partial:A_BomoBR_DN30799_c2_g7_i1
101bp
 PREDICTED:_RING-box_protein_2_[Papilio_xuthus]
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0019788 F NEDD8 transferase activity
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031466 C Cul5-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0051775 P response to redox state
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
957 O_BomoBR100862_5prime_partial:A_BomoBR_DN30799_c2_g2_i7
261bp
 uncharacterized_protein_LOC110374039_[Helicoverpa_armigera]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
958 O_BomoBR100863_complete:A_BomoBR_DN30799_c2_g2_i8
126bp
 uncharacterized_protein_LOC110374039_[Helicoverpa_armigera]
959 O_BomoBR100864_complete:A_BomoBR_DN30799_c2_g2_i9
216bp
 uncharacterized_protein_LOC110374039_[Helicoverpa_armigera]
960 O_BomoBR100865_complete:A_BomoBR_DN30799_c2_g2_i10
216bp
 uncharacterized_protein_LOC110374039_[Helicoverpa_armigera]
previous next from show/103968

- SilkBase 1999-2023 -