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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
91 O_BomoBR100082_complete:A_BomoBR_DN30744_c6_g5_i5
499bp
 pentatricopeptide_repeat-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0042780 P tRNA 3'-end processing
92 O_BomoBR100083_3prime_partial:A_BomoBR_DN30744_c6_g5_i5
148bp
 pentatricopeptide_repeat-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0042780 P tRNA 3'-end processing
GO:0044822 F RNA binding
93 O_BomoBR100084_3prime_partial:A_BomoBR_DN30776_c7_g1_i1
603bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
94 O_BomoBR100085_5prime_partial:A_BomoBR_DN30776_c7_g1_i1
122bp
95 O_BomoBR100086_complete:A_BomoBR_DN30776_c7_g1_i1
112bp
96 O_BomoBR100087_5prime_partial:A_BomoBR_DN30776_c7_g3_i1
106bp
97 O_BomoBR100088_3prime_partial:A_BomoBR_DN30776_c7_g1_i2
240bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
98 O_BomoBR100089_5prime_partial:A_BomoBR_DN30776_c7_g4_i1
129bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
99 O_BomoBR10008_complete:A_BomoBR_DN31369_c1_g2_i14
165bp
100 O_BomoBR100090_complete:A_BomoBR_DN30776_c7_g4_i3
111bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
101 O_BomoBR100091_3prime_partial:A_BomoBR_DN30776_c7_g1_i3
119bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
102 O_BomoBR100092_5prime_partial:A_BomoBR_DN30776_c7_g4_i4
108bp
 PREDICTED:_cysteine--tRNA_ligase,_cytoplasmic_[Papilio_polytes]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
103 O_BomoBR100093_3prime_partial:A_BomoBR_DN30776_c7_g1_i4
161bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
104 O_BomoBR100094_5prime_partial:A_BomoBR_DN30776_c7_g1_i4
122bp
105 O_BomoBR100095_complete:A_BomoBR_DN30776_c7_g1_i4
112bp
106 O_BomoBR100096_3prime_partial:A_BomoBR_DN30776_c7_g1_i5
265bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
107 O_BomoBR100097_complete:A_BomoBR_DN30776_c7_g1_i5
215bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
108 O_BomoBR100098_5prime_partial:A_BomoBR_DN30776_c7_g1_i5
122bp
109 O_BomoBR100099_complete:A_BomoBR_DN30776_c7_g1_i5
112bp
110 O_BomoBR10009_complete:A_BomoBR_DN31369_c1_g2_i14
140bp
111 O_BomoBR1000_3prime_partial:A_BomoBR_DN30295_c0_g1_i16
398bp
 uncharacterized_protein_LOC101745679,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007029 P endoplasmic reticulum organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0021762 P substantia nigra development
GO:0048208 P COPII vesicle coating
112 O_BomoBR100100_5prime_partial:A_BomoBR_DN30776_c7_g2_i2
328bp
 fasciculation_and_elongation_protein_zeta-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:1902902 P negative regulation of autophagosome assembly
113 O_BomoBR100101_3prime_partial:A_BomoBR_DN30776_c7_g2_i2
115bp
114 O_BomoBR100102_3prime_partial:A_BomoBR_DN30776_c7_g1_i6
540bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
115 O_BomoBR100103_5prime_partial:A_BomoBR_DN30776_c7_g1_i6
122bp
116 O_BomoBR100104_complete:A_BomoBR_DN30776_c7_g1_i6
112bp
117 O_BomoBR100105_5prime_partial:A_BomoBR_DN30776_c7_g2_i3
431bp
 fasciculation_and_elongation_protein_zeta-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:1902902 P negative regulation of autophagosome assembly
118 O_BomoBR100106_3prime_partial:A_BomoBR_DN30776_c7_g2_i3
115bp
119 O_BomoBR100107_complete:A_BomoBR_DN30756_c0_g1_i1
110bp
 hypothetical_protein_EAI_03039,_partial_[Harpegnathos_saltator]
120 O_BomoBR100108_3prime_partial:A_BomoBR_DN30756_c0_g1_i6
115bp
 hypothetical_protein_ALC60_07366_[Trachymyrmex_zeteki]
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