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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
601 O_BomoBR100541_complete:A_BomoBR_DN30702_c1_g1_i3
383bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
602 O_BomoBR100542_complete:A_BomoBR_DN30702_c1_g1_i7
383bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
603 O_BomoBR100543_complete:A_BomoBR_DN30702_c1_g1_i8
433bp
 lachesin_isoform_X1_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
604 O_BomoBR100544_complete:A_BomoBR_DN30702_c1_g1_i9
433bp
 lachesin_isoform_X1_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
605 O_BomoBR100545_complete:A_BomoBR_DN30702_c1_g1_i10
388bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
606 O_BomoBR100546_complete:A_BomoBR_DN30702_c1_g1_i11
428bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
607 O_BomoBR100547_complete:A_BomoBR_DN30702_c1_g1_i12
428bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
608 O_BomoBR100548_complete:A_BomoBR_DN30702_c1_g2_i6
253bp
 RNA-binding_protein_4.1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
609 O_BomoBR100549_complete:A_BomoBR_DN30702_c1_g2_i6
105bp
610 O_BomoBR10054_complete:A_BomoBR_DN31320_c0_g1_i5
245bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X3_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
611 O_BomoBR100550_complete:A_BomoBR_DN30702_c1_g2_i7
253bp
 RNA-binding_protein_4.1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
612 O_BomoBR100551_complete:A_BomoBR_DN30702_c1_g2_i7
105bp
613 O_BomoBR100552_complete:A_BomoBR_DN30702_c1_g2_i9
258bp
 RNA-binding_protein_4.1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
614 O_BomoBR100553_3prime_partial:A_BomoBR_DN30702_c1_g2_i9
147bp
615 O_BomoBR100554_complete:A_BomoBR_DN30702_c1_g2_i10
272bp
 bmp-2_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0006417 P regulation of translation
GO:0007623 P circadian rhythm
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0010628 P positive regulation of gene expression
GO:0032922 P circadian regulation of gene expression
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
616 O_BomoBR100555_complete:A_BomoBR_DN30702_c1_g2_i10
118bp
617 O_BomoBR100556_5prime_partial:A_BomoBR_DN30736_c2_g1_i1
186bp
 gag-like_protein_[Bombyx_mori]
618 O_BomoBR100557_complete:A_BomoBR_DN30736_c2_g1_i1
118bp
619 O_BomoBR100558_3prime_partial:A_BomoBR_DN30736_c2_g2_i1
179bp
 Gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
620 O_BomoBR100559_5prime_partial:A_BomoBR_DN30736_c2_g2_i1
143bp
621 O_BomoBR10055_complete:A_BomoBR_DN31320_c0_g1_i6
406bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
622 O_BomoBR100560_internal:A_BomoBR_DN30736_c2_g2_i2
177bp
 Gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
623 O_BomoBR100561_5prime_partial:A_BomoBR_DN30736_c2_g2_i2
143bp
624 O_BomoBR100562_3prime_partial:A_BomoBR_DN30736_c2_g2_i4
179bp
 Gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
625 O_BomoBR100563_5prime_partial:A_BomoBR_DN30736_c2_g2_i4
122bp
626 O_BomoBR100564_5prime_partial:A_BomoBR_DN30736_c2_g2_i5
185bp
 Gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
627 O_BomoBR100565_complete:A_BomoBR_DN30736_c2_g2_i5
105bp
 uncharacterized_protein_LOC110386559_[Bombyx_mori]
628 O_BomoBR100566_internal:A_BomoBR_DN30736_c2_g2_i6
177bp
 Gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
629 O_BomoBR100567_5prime_partial:A_BomoBR_DN30736_c2_g2_i6
143bp
630 O_BomoBR100568_internal:A_BomoBR_DN30736_c2_g2_i7
111bp
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