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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
541 O_BomoBR100488_complete:A_BomoBR_DN30757_c8_g5_i3
130bp
542 O_BomoBR100489_complete:A_BomoBR_DN30757_c8_g5_i3
112bp
543 O_BomoBR10048_complete:A_BomoBR_DN31320_c0_g3_i2
112bp
544 O_BomoBR100490_3prime_partial:A_BomoBR_DN30757_c8_g5_i3
107bp
545 O_BomoBR100491_complete:A_BomoBR_DN30757_c8_g5_i3
103bp
546 O_BomoBR100492_complete:A_BomoBR_DN30757_c8_g5_i4
124bp
547 O_BomoBR100493_internal:A_BomoBR_DN30757_c8_g3_i6
107bp
548 O_BomoBR100494_internal:A_BomoBR_DN30757_c8_g3_i6
107bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
549 O_BomoBR100495_3prime_partial:A_BomoBR_DN30757_c8_g3_i7
321bp
 serine/arginine_repetitive_matrix_protein_2_isoform_X7_[Bombyx_mori]
550 O_BomoBR100496_3prime_partial:A_BomoBR_DN30757_c8_g5_i5
1295bp
 protein_piccolo_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006469 P negative regulation of protein kinase activity
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0035690 P cellular response to xenobiotic stimulus
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0043169 F cation binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0051496 P positive regulation of stress fiber assembly
551 O_BomoBR100497_complete:A_BomoBR_DN30757_c8_g5_i5
130bp
552 O_BomoBR100498_complete:A_BomoBR_DN30757_c8_g5_i5
112bp
553 O_BomoBR100499_complete:A_BomoBR_DN30757_c8_g5_i5
103bp
554 O_BomoBR10049_complete:A_BomoBR_DN31320_c0_g3_i2
106bp
555 O_BomoBR1004_3prime_partial:A_BomoBR_DN30295_c0_g2_i5
132bp
 centaurin-gamma-1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0072375 P medium-term memory
556 O_BomoBR100500_5prime_partial:A_BomoBR_DN30757_c8_g10_i1
595bp
 protein_piccolo_[Bombyx_mori]
557 O_BomoBR100501_complete:A_BomoBR_DN30757_c8_g10_i1
337bp
558 O_BomoBR100502_complete:A_BomoBR_DN30757_c8_g10_i1
287bp
559 O_BomoBR100503_complete:A_BomoBR_DN30708_c0_g3_i1
539bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007368 P determination of left/right symmetry
GO:0008589 P regulation of smoothened signaling pathway
GO:0010669 P epithelial structure maintenance
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035058 P non-motile cilium assembly
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0048706 P embryonic skeletal system development
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0060271 P cilium assembly
GO:0060322 P head development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061009 P common bile duct development
GO:1901620 P regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:1903887 P motile cilium assembly
GO:1990403 P embryonic brain development
GO:2000095 P regulation of Wnt signaling pathway, planar cell polarity pathway
560 O_BomoBR100504_5prime_partial:A_BomoBR_DN30708_c0_g3_i3
100bp
 PREDICTED:_Meckel_syndrome_type_1_protein-like_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0030030 P cell projection organization
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
561 O_BomoBR100505_complete:A_BomoBR_DN30708_c0_g3_i5
441bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007368 P determination of left/right symmetry
GO:0008589 P regulation of smoothened signaling pathway
GO:0010669 P epithelial structure maintenance
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035058 P non-motile cilium assembly
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0048706 P embryonic skeletal system development
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0060271 P cilium assembly
GO:0060322 P head development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061009 P common bile duct development
GO:1901620 P regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:1903887 P motile cilium assembly
GO:1990403 P embryonic brain development
GO:2000095 P regulation of Wnt signaling pathway, planar cell polarity pathway
562 O_BomoBR100506_5prime_partial:A_BomoBR_DN30708_c0_g3_i6
315bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007368 P determination of left/right symmetry
GO:0008589 P regulation of smoothened signaling pathway
GO:0010669 P epithelial structure maintenance
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035058 P non-motile cilium assembly
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0048706 P embryonic skeletal system development
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0060271 P cilium assembly
GO:0060322 P head development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061009 P common bile duct development
GO:1901620 P regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:1903887 P motile cilium assembly
GO:1990403 P embryonic brain development
GO:2000095 P regulation of Wnt signaling pathway, planar cell polarity pathway
563 O_BomoBR100507_complete:A_BomoBR_DN30708_c0_g3_i7
103bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
564 O_BomoBR100508_complete:A_BomoBR_DN30708_c0_g3_i8
141bp
 PREDICTED:_Meckel_syndrome_type_1_protein-like_[Papilio_xuthus]
565 O_BomoBR100509_5prime_partial:A_BomoBR_DN30708_c0_g3_i9
198bp
 PREDICTED:_Meckel_syndrome_type_1_protein-like_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0030030 P cell projection organization
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
566 O_BomoBR10050_5prime_partial:A_BomoBR_DN31320_c0_g3_i3
1022bp
 SCY1-like_protein_2_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0004672 F protein kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000286 P receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
567 O_BomoBR100510_complete:A_BomoBR_DN30708_c0_g3_i10
141bp
 PREDICTED:_Meckel_syndrome_type_1_protein-like_[Papilio_xuthus]
568 O_BomoBR100511_complete:A_BomoBR_DN30708_c0_g3_i11
264bp
 uncharacterized_protein_LOC101736053_[Bombyx_mori]
569 O_BomoBR100512_complete:A_BomoBR_DN30796_c1_g1_i1
147bp
 PREDICTED:_zinc_finger_MYM-type_protein_1-like_[Solenopsis_invicta]
570 O_BomoBR100513_complete:A_BomoBR_DN30796_c1_g2_i1
746bp
 non-receptor_tyrosine-protein_kinase_TNK1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005154 F epidermal growth factor receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0006897 P endocytosis
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030659 C cytoplasmic vesicle membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031410 C cytoplasmic vesicle
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0050699 F WW domain binding
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0070436 C Grb2-EGFR complex
GO:2000369 P regulation of clathrin-dependent endocytosis
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