SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/103968
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
331 O_BomoBR100299_complete:A_BomoBR_DN30797_c1_g1_i12
109bp
332 O_BomoBR10029_complete:A_BomoBR_DN31369_c1_g2_i16
165bp
333 O_BomoBR1002_complete:A_BomoBR_DN30295_c0_g1_i16
142bp
334 O_BomoBR100300_complete:A_BomoBR_DN30797_c1_g1_i13
1468bp
 restin_homolog_isoform_X3_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
335 O_BomoBR100301_complete:A_BomoBR_DN30797_c1_g1_i13
109bp
336 O_BomoBR100302_5prime_partial:A_BomoBR_DN30797_c1_g1_i15
388bp
 restin_homolog_isoform_X8_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
337 O_BomoBR100303_complete:A_BomoBR_DN30797_c1_g1_i15
109bp
338 O_BomoBR100304_3prime_partial:A_BomoBR_DN30797_c1_g1_i18
925bp
 restin_homolog_isoform_X6_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
339 O_BomoBR100305_complete:A_BomoBR_DN30797_c1_g1_i18
109bp
340 O_BomoBR100306_3prime_partial:A_BomoBR_DN30797_c1_g1_i20
925bp
 restin_homolog_isoform_X6_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007017 P microtubule-based process
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030424 C axon
GO:0035371 C microtubule plus-end
GO:0044295 C axonal growth cone
GO:0045169 C fusome
GO:0051010 F microtubule plus-end binding
GO:0070854 F myosin VI heavy chain binding
341 O_BomoBR100307_complete:A_BomoBR_DN30797_c1_g1_i20
109bp
342 O_BomoBR100308_5prime_partial:A_BomoBR_DN30791_c15_g1_i1
101bp
343 O_BomoBR100309_complete:A_BomoBR_DN30704_c5_g3_i1
1507bp
 uncharacterized_protein_LOC101743267_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017016 F small GTPase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:1903697 P negative regulation of microvillus assembly
GO:1904425 P negative regulation of GTP binding
GO:1904442 P negative regulation of thyroid gland epithelial cell proliferation
GO:1990792 P cellular response to glial cell derived neurotrophic factor
344 O_BomoBR10030_complete:A_BomoBR_DN31369_c1_g2_i16
140bp
345 O_BomoBR100310_complete:A_BomoBR_DN30704_c5_g3_i1
139bp
346 O_BomoBR100311_complete:A_BomoBR_DN30704_c5_g3_i1
129bp
347 O_BomoBR100312_complete:A_BomoBR_DN30704_c5_g3_i1
111bp
348 O_BomoBR100313_complete:A_BomoBR_DN30704_c5_g4_i1
105bp
 transposase,_partial_[Cadra_cautella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
349 O_BomoBR100314_complete:A_BomoBR_DN30704_c5_g3_i2
997bp
 uncharacterized_protein_LOC101743267_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017016 F small GTPase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:1903697 P negative regulation of microvillus assembly
GO:1904425 P negative regulation of GTP binding
GO:1904442 P negative regulation of thyroid gland epithelial cell proliferation
GO:1990792 P cellular response to glial cell derived neurotrophic factor
350 O_BomoBR100315_complete:A_BomoBR_DN30704_c5_g3_i2
139bp
351 O_BomoBR100316_complete:A_BomoBR_DN30704_c5_g3_i2
111bp
352 O_BomoBR100317_complete:A_BomoBR_DN30704_c5_g7_i1
181bp
 CKLF-like_MARVEL_transmembrane_domain-containing_protein_4_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005615 C extracellular space
GO:0006935 P chemotaxis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
353 O_BomoBR100318_complete:A_BomoBR_DN30704_c5_g3_i4
1507bp
 uncharacterized_protein_LOC101743267_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017016 F small GTPase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:1903697 P negative regulation of microvillus assembly
GO:1904425 P negative regulation of GTP binding
GO:1904442 P negative regulation of thyroid gland epithelial cell proliferation
GO:1990792 P cellular response to glial cell derived neurotrophic factor
354 O_BomoBR100319_complete:A_BomoBR_DN30704_c5_g3_i4
139bp
355 O_BomoBR10031_complete:A_BomoBR_DN31369_c1_g2_i16
132bp
356 O_BomoBR100320_complete:A_BomoBR_DN30704_c5_g3_i4
133bp
357 O_BomoBR100321_complete:A_BomoBR_DN30704_c5_g3_i4
111bp
358 O_BomoBR100322_complete:A_BomoBR_DN30704_c5_g3_i5
645bp
 uncharacterized_protein_LOC101743267_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017016 F small GTPase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:1903697 P negative regulation of microvillus assembly
GO:1904425 P negative regulation of GTP binding
GO:1904442 P negative regulation of thyroid gland epithelial cell proliferation
GO:1990792 P cellular response to glial cell derived neurotrophic factor
359 O_BomoBR100323_complete:A_BomoBR_DN30704_c5_g3_i5
139bp
360 O_BomoBR100324_complete:A_BomoBR_DN30704_c5_g3_i5
113bp
previous next from show/103968

- SilkBase 1999-2023 -