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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2761 O_BomoBR102486_internal:A_BomoBR_DN29838_c6_g1_i3
120bp
2762 O_BomoBR102487_5prime_partial:A_BomoBR_DN29838_c7_g2_i1
235bp
 uncharacterized_protein_LOC110384931_[Bombyx_mori]
2763 O_BomoBR102488_5prime_partial:A_BomoBR_DN29838_c7_g2_i2
235bp
 uncharacterized_protein_LOC110384931_[Bombyx_mori]
2764 O_BomoBR102489_5prime_partial:A_BomoBR_DN29838_c7_g2_i3
234bp
 uncharacterized_protein_LOC110384931_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
2765 O_BomoBR10248_complete:A_BomoBR_DN31308_c0_g1_i19
117bp
2766 O_BomoBR102490_5prime_partial:A_BomoBR_DN29838_c7_g2_i4
236bp
 uncharacterized_protein_LOC110384931_[Bombyx_mori]
2767 O_BomoBR102491_5prime_partial:A_BomoBR_DN29838_c7_g2_i5
203bp
 uncharacterized_protein_LOC110384931_[Bombyx_mori]
2768 O_BomoBR102492_internal:A_BomoBR_DN29838_c7_g2_i6
148bp
 uncharacterized_protein_LOC105841952_[Bombyx_mori]
2769 O_BomoBR102493_complete:A_BomoBR_DN29838_c8_g1_i1
483bp
 uncharacterized_protein_LOC101744110_isoform_X8_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2770 O_BomoBR102494_complete:A_BomoBR_DN29838_c8_g1_i2
561bp
 uncharacterized_protein_LOC101744110_isoform_X8_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2771 O_BomoBR102495_complete:A_BomoBR_DN29838_c8_g1_i2
117bp
2772 O_BomoBR102496_5prime_partial:A_BomoBR_DN29838_c8_g1_i3
520bp
 uncharacterized_protein_LOC101744110_isoform_X10_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2773 O_BomoBR102497_complete:A_BomoBR_DN29838_c8_g1_i5
519bp
 uncharacterized_protein_LOC101744110_isoform_X8_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2774 O_BomoBR102498_5prime_partial:A_BomoBR_DN29838_c8_g1_i6
562bp
 uncharacterized_protein_LOC101744110_isoform_X10_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2775 O_BomoBR102499_complete:A_BomoBR_DN29838_c8_g1_i6
117bp
2776 O_BomoBR10249_complete:A_BomoBR_DN31308_c0_g1_i20
156bp
2777 O_BomoBR1024_complete:A_BomoBR_DN30295_c0_g1_i20
135bp
 Uncharacterized_protein_OBRU01_12463_[Operophtera_brumata]
GO:0005509 F calcium ion binding
GO:0007160 P cell-matrix adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2778 O_BomoBR102500_complete:A_BomoBR_DN29838_c8_g1_i8
176bp
 PREDICTED:_uncharacterized_protein_LOC106644261_[Copidosoma_floridanum]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008174 F mRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032259 P methylation
GO:0039694 P viral RNA genome replication
GO:0080009 P mRNA methylation
2779 O_BomoBR102501_5prime_partial:A_BomoBR_DN29838_c8_g1_i8
141bp
 zinc_finger_protein_39_isoform_X15_[Bombyx_mori]
2780 O_BomoBR102502_5prime_partial:A_BomoBR_DN29838_c8_g1_i10
141bp
 zinc_finger_protein_39_isoform_X15_[Bombyx_mori]
2781 O_BomoBR102503_complete:A_BomoBR_DN29838_c8_g1_i11
176bp
 PREDICTED:_uncharacterized_protein_LOC106644261_[Copidosoma_floridanum]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008174 F mRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032259 P methylation
GO:0039694 P viral RNA genome replication
GO:0080009 P mRNA methylation
2782 O_BomoBR102504_complete:A_BomoBR_DN29838_c8_g1_i13
176bp
 PREDICTED:_uncharacterized_protein_LOC106644261_[Copidosoma_floridanum]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008174 F mRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032259 P methylation
GO:0039694 P viral RNA genome replication
GO:0080009 P mRNA methylation
2783 O_BomoBR102505_5prime_partial:A_BomoBR_DN29838_c8_g1_i13
141bp
 zinc_finger_protein_39_isoform_X15_[Bombyx_mori]
2784 O_BomoBR102506_complete:A_BomoBR_DN29838_c8_g1_i14
176bp
 uncharacterized_protein_LOC101744110_isoform_X4_[Bombyx_mori]
2785 O_BomoBR102507_complete:A_BomoBR_DN29838_c8_g1_i14
176bp
 PREDICTED:_uncharacterized_protein_LOC106644261_[Copidosoma_floridanum]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008174 F mRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032259 P methylation
GO:0039694 P viral RNA genome replication
GO:0080009 P mRNA methylation
2786 O_BomoBR102508_complete:A_BomoBR_DN29838_c8_g1_i14
100bp
2787 O_BomoBR102509_complete:A_BomoBR_DN29838_c8_g1_i15
176bp
 PREDICTED:_uncharacterized_protein_LOC106644261_[Copidosoma_floridanum]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008174 F mRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032259 P methylation
GO:0039694 P viral RNA genome replication
GO:0080009 P mRNA methylation
2788 O_BomoBR10250_complete:A_BomoBR_DN31308_c0_g1_i20
117bp
2789 O_BomoBR102510_5prime_partial:A_BomoBR_DN29838_c8_g1_i16
417bp
 uncharacterized_protein_LOC101744110_isoform_X10_[Bombyx_mori]
2790 O_BomoBR102511_3prime_partial:A_BomoBR_DN29838_c8_g1_i18
566bp
 uncharacterized_protein_LOC101744110_isoform_X8_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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