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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1831 O_BomoBR101649_complete:A_BomoBR_DN29852_c1_g1_i37
163bp
1832 O_BomoBR10164_complete:A_BomoBR_DN31333_c3_g1_i9
212bp
1833 O_BomoBR101650_complete:A_BomoBR_DN29852_c1_g1_i37
127bp
1834 O_BomoBR101651_complete:A_BomoBR_DN29852_c1_g1_i37
124bp
1835 O_BomoBR101652_complete:A_BomoBR_DN29852_c1_g1_i37
107bp
1836 O_BomoBR101653_complete:A_BomoBR_DN29852_c1_g1_i38
1170bp
 dystrophin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007274 P neuromuscular synaptic transmission
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008092 F cytoskeletal protein binding
GO:0008270 F zinc ion binding
GO:0008307 F structural constituent of muscle
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0030010 P establishment of cell polarity
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0050699 F WW domain binding
1837 O_BomoBR101654_complete:A_BomoBR_DN29852_c1_g1_i38
163bp
1838 O_BomoBR101655_complete:A_BomoBR_DN29852_c1_g1_i38
127bp
1839 O_BomoBR101656_complete:A_BomoBR_DN29852_c1_g1_i38
124bp
1840 O_BomoBR101657_complete:A_BomoBR_DN29852_c1_g1_i38
107bp
1841 O_BomoBR101658_5prime_partial:A_BomoBR_DN29877_c1_g1_i2
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1842 O_BomoBR101659_complete:A_BomoBR_DN29877_c1_g1_i2
138bp
 ORF_B_(bases_1850-5560)_first_start_codon_at_2306_[Autographa_californica_nucleopolyhedrovirus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1843 O_BomoBR10165_complete:A_BomoBR_DN31333_c3_g1_i9
109bp
1844 O_BomoBR101660_5prime_partial:A_BomoBR_DN29877_c1_g1_i4
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1845 O_BomoBR101661_3prime_partial:A_BomoBR_DN29877_c1_g1_i4
272bp
 PREDICTED:_uncharacterized_protein_LOC106123604_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1846 O_BomoBR101662_complete:A_BomoBR_DN29877_c1_g1_i4
271bp
 PREDICTED:_uncharacterized_protein_LOC106136109_[Amyelois_transitella]
1847 O_BomoBR101663_5prime_partial:A_BomoBR_DN29877_c1_g1_i6
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1848 O_BomoBR101664_5prime_partial:A_BomoBR_DN29877_c1_g1_i8
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1849 O_BomoBR101665_5prime_partial:A_BomoBR_DN29877_c1_g1_i9
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1850 O_BomoBR101666_3prime_partial:A_BomoBR_DN29877_c1_g1_i9
272bp
 PREDICTED:_uncharacterized_protein_LOC106123604_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1851 O_BomoBR101667_complete:A_BomoBR_DN29877_c1_g1_i9
271bp
 PREDICTED:_uncharacterized_protein_LOC106136109_[Amyelois_transitella]
1852 O_BomoBR101668_5prime_partial:A_BomoBR_DN29877_c1_g1_i12
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1853 O_BomoBR101669_5prime_partial:A_BomoBR_DN29877_c1_g1_i14
370bp
 PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1854 O_BomoBR10166_complete:A_BomoBR_DN31333_c3_g1_i10
954bp
titin_isoform_X1_[Bombyx_mori]
1855 O_BomoBR101670_3prime_partial:A_BomoBR_DN29877_c1_g1_i14
272bp
 PREDICTED:_uncharacterized_protein_LOC106123604_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1856 O_BomoBR101671_complete:A_BomoBR_DN29877_c1_g1_i14
271bp
 PREDICTED:_uncharacterized_protein_LOC106136109_[Amyelois_transitella]
1857 O_BomoBR101672_complete:A_BomoBR_DN29857_c6_g1_i1
275bp
 E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
1858 O_BomoBR101673_3prime_partial:A_BomoBR_DN29857_c6_g1_i2
382bp
 E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0002669 P positive regulation of T cell anergy
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0035519 P protein K29-linked ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043021 F ribonucleoprotein complex binding
GO:0043066 P negative regulation of apoptotic process
GO:0045087 P innate immune response
GO:0045236 F CXCR chemokine receptor binding
GO:0045732 P positive regulation of protein catabolic process
GO:0046329 P negative regulation of JNK cascade
GO:0046642 P negative regulation of alpha-beta T cell proliferation
GO:0050687 P negative regulation of defense response to virus
GO:0051607 P defense response to virus
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0090085 P regulation of protein deubiquitination
1859 O_BomoBR101674_5prime_partial:A_BomoBR_DN29857_c6_g1_i2
130bp
1860 O_BomoBR101675_3prime_partial:A_BomoBR_DN29857_c6_g1_i3
391bp
 E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0002669 P positive regulation of T cell anergy
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0035519 P protein K29-linked ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043021 F ribonucleoprotein complex binding
GO:0043066 P negative regulation of apoptotic process
GO:0045087 P innate immune response
GO:0045236 F CXCR chemokine receptor binding
GO:0045732 P positive regulation of protein catabolic process
GO:0046329 P negative regulation of JNK cascade
GO:0046642 P negative regulation of alpha-beta T cell proliferation
GO:0050687 P negative regulation of defense response to virus
GO:0051607 P defense response to virus
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0090085 P regulation of protein deubiquitination
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