Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1261	O_BomoBR101135_complete:A_BomoBR_DN12682_c0_g1_i2 144bp	Bomo_Chr10	NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_11,_mitochondrial_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005747 C mitochondrial respiratory chain complex I GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0055114 P obsolete oxidation-reduction process GO:0070469 C respirasome
1262	O_BomoBR101136_internal:A_BomoBR_DN12694_c0_g1_i1 277bp	Bomo_Chr12	LOW_QUALITY_PROTEIN:_cadherin-related_tumor_suppressor_[Bombyx_mori]	GO:0000904 P cell morphogenesis involved in differentiation GO:0001736 P establishment of planar polarity GO:0001737 P establishment of imaginal disc-derived wing hair orientation GO:0004872 F signaling receptor activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005739 C mitochondrion GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0007155 P cell adhesion GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules GO:0007164 P establishment of tissue polarity GO:0007446 P imaginal disc growth GO:0007447 P imaginal disc pattern formation GO:0007476 P imaginal disc-derived wing morphogenesis GO:0008283 P cell population proliferation GO:0008285 P negative regulation of cell population proliferation GO:0009888 P tissue development GO:0010629 P negative regulation of gene expression GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016318 P ommatidial rotation GO:0016324 C apical plasma membrane GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium GO:0016337 P cell-cell adhesion GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules GO:0018149 P peptide cross-linking GO:0030178 P negative regulation of Wnt signaling pathway GO:0032880 P regulation of protein localization GO:0035159 P regulation of tube length, open tracheal system GO:0035209 P pupal development GO:0035220 P wing disc development GO:0035329 P hippo signaling GO:0040008 P regulation of growth GO:0042067 P establishment of ommatidial planar polarity GO:0044331 P cell-cell adhesion mediated by cadherin GO:0045198 P establishment of epithelial cell apical/basal polarity GO:0045296 F cadherin binding GO:0045317 P equator specification GO:0045570 P regulation of imaginal disc growth GO:0045571 P negative regulation of imaginal disc growth GO:0045926 P negative regulation of growth GO:0046620 P regulation of organ growth GO:0048105 P establishment of body hair planar orientation GO:0050839 F cell adhesion molecule binding GO:0090176 P microtubule cytoskeleton organization involved in establishment of planar polarity
1263	O_BomoBR101137_complete:A_BomoBR_DN12694_c0_g1_i1 114bp	Bomo_Chr12
1264	O_BomoBR101138_complete:A_BomoBR_DN13929_c0_g1_i1 136bp	Bomo_Chr22	transmembrane_protease_serine_12_[Helicoverpa_armigera]
1265	O_BomoBR101139_complete:A_BomoBR_DN13929_c0_g1_i2 207bp	Bomo_Chr22	transmembrane_protease_serine_12_[Helicoverpa_armigera]
1266	O_BomoBR10113_complete:A_BomoBR_DN31302_c6_g3_i1 150bp	Bomo_Chr7	EH_domain-containing_protein_3_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005509 F calcium ion binding GO:0005524 F ATP binding GO:0005525 F GTP binding GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005886 C plasma membrane GO:0005929 C cilium GO:0016020 C membrane GO:0020018 C ciliary pocket membrane GO:0030030 P cell projection organization GO:0032456 P endocytic recycling GO:0042384 P cilium assembly GO:0042995 C cell projection GO:0046872 F metal ion binding GO:0051260 P protein homooligomerization GO:0055038 C recycling endosome membrane GO:0060170 C ciliary membrane
1267	O_BomoBR101140_5prime_partial:A_BomoBR_DN13936_c0_g1_i1 140bp	Bomo_Chr14	uncharacterized_protein_LOC101746003_[Bombyx_mori]
1268	O_BomoBR101141_5prime_partial:A_BomoBR_DN13942_c0_g1_i1 120bp	Bomo_Chr12
1269	O_BomoBR101142_3prime_partial:A_BomoBR_DN13950_c0_g1_i1 277bp	Bomo_Chr23	uncharacterized_protein_LOC101742706_[Bombyx_mori]
1270	O_BomoBR101143_internal:A_BomoBR_DN13983_c0_g1_i1 124bp	Bomo_Chr9	uncharacterized_protein_LOC101735593_[Bombyx_mori]
1271	O_BomoBR101144_5prime_partial:A_BomoBR_DN25376_c0_g1_i1 341bp	Bomo_Chr9	uncharacterized_protein_LOC110382062_[Helicoverpa_armigera]	GO:0000987 F cis-regulatory region sequence-specific DNA binding GO:0005634 C nucleus GO:0010030 P positive regulation of seed germination GO:0043985 P histone H4-R3 methylation
1272	O_BomoBR101145_5prime_partial:A_BomoBR_DN25376_c0_g1_i2 272bp	Bomo_Chr9	uncharacterized_protein_LOC110382062_[Helicoverpa_armigera]
1273	O_BomoBR101146_5prime_partial:A_BomoBR_DN25326_c0_g1_i1 142bp	Bomo_Chr11	putative_defense_protein_precursor_[Bombyx_mori]	GO:0002376 P immune system process GO:0003674 F molecular_function GO:0005576 C extracellular region GO:0042742 P defense response to bacterium GO:0042832 P defense response to protozoan GO:0045087 P innate immune response
1274	O_BomoBR101147_5prime_partial:A_BomoBR_DN25326_c0_g1_i2 195bp	Bomo_Chr11	putative_defense_protein_precursor_[Bombyx_mori]	GO:0002376 P immune system process GO:0003674 F molecular_function GO:0005576 C extracellular region GO:0042742 P defense response to bacterium GO:0042832 P defense response to protozoan GO:0045087 P innate immune response
1275	O_BomoBR101148_internal:A_BomoBR_DN25384_c0_g1_i1 260bp	Bomo_Chr11	carcinine_transporter_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
1276	O_BomoBR101149_5prime_partial:A_BomoBR_DN25384_c0_g1_i2 169bp	Bomo_Chr11	carcinine_transporter_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
1277	O_BomoBR10114_complete:A_BomoBR_DN31302_c6_g3_i1 112bp	Bomo_Chr7
1278	O_BomoBR101150_complete:A_BomoBR_DN25394_c0_g1_i1 136bp	Bomo_Chr4
1279	O_BomoBR101151_complete:A_BomoBR_DN25349_c0_g1_i1 145bp	Bomo_Chr5	39S_ribosomal_protein_L53,_mitochondrial_[Bombyx_mori]	GO:0005515 F protein binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005840 C ribosome GO:0030529 C ribonucleoprotein complex GO:0070125 P mitochondrial translational elongation GO:0070126 P mitochondrial translational termination
1280	O_BomoBR101152_complete:A_BomoBR_DN25347_c0_g1_i1 103bp	Bomo_Chr20
1281	O_BomoBR101153_internal:A_BomoBR_DN25304_c0_g1_i1 115bp	Bomo_Chr6
1282	O_BomoBR101154_internal:A_BomoBR_DN25304_c0_g1_i1 115bp	Bomo_Chr6
1283	O_BomoBR101155_internal:A_BomoBR_DN25304_c0_g1_i1 115bp	Bomo_Chr6	ras_GTPase-activating_protein-binding_protein_2_[Helicoverpa_armigera]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006810 P transport GO:0007264 P small GTPase mediated signal transduction GO:0044822 F RNA binding GO:0051028 P mRNA transport
1284	O_BomoBR101156_5prime_partial:A_BomoBR_DN25355_c0_g1_i1 168bp	Bomo_Chr28
1285	O_BomoBR101157_complete:A_BomoBR_DN25355_c0_g1_i1 119bp	Bomo_Chr28	uncharacterized_protein_LOC101746461_[Bombyx_mori]	GO:0005576 C extracellular region
1286	O_BomoBR101158_5prime_partial:A_BomoBR_DN25353_c0_g1_i1 391bp	Bomo_Chr4	collagen,_type_IV_[Bombyx_mori]	GO:0005201 F extracellular matrix structural constituent GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005581 C collagen trimer GO:0005604 C basement membrane
1287	O_BomoBR101159_internal:A_BomoBR_DN25357_c0_g1_i1 113bp	Bomo_Chr7	regulator_of_G-protein_signaling_loco_[Bombyx_mori]
1288	O_BomoBR10115_3prime_partial:A_BomoBR_DN31302_c6_g2_i2 158bp	Bomo_Chr21	D-amino-acid_oxidase_[Bombyx_mori]	GO:0003884 F D-amino-acid oxidase activity GO:0005102 F signaling receptor binding GO:0005515 F protein binding GO:0005777 C peroxisome GO:0005782 C peroxisomal matrix GO:0006531 P aspartate metabolic process GO:0006533 P aspartate catabolic process GO:0007320 P insemination GO:0007625 P grooming behavior GO:0008445 F D-aspartate oxidase activity GO:0016491 F oxidoreductase activity GO:0019478 P D-amino acid catabolic process GO:0042445 P hormone metabolic process GO:0046416 P D-amino acid metabolic process GO:0046487 P glyoxylate metabolic process GO:0048037 F obsolete cofactor binding GO:0055114 P obsolete oxidation-reduction process GO:0071949 F FAD binding
1289	O_BomoBR101160_internal:A_BomoBR_DN25357_c0_g1_i1 112bp	Bomo_Chr7
1290	O_BomoBR101161_internal:A_BomoBR_DN25357_c0_g1_i1 112bp	Bomo_Chr7