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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1021 O_BomoBR10091_complete:A_BomoBR_DN31320_c0_g1_i19
344bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
1022 O_BomoBR100920_complete:A_BomoBR_DN30770_c0_g1_i13
556bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
1023 O_BomoBR100921_complete:A_BomoBR_DN30770_c0_g1_i13
128bp
1024 O_BomoBR100922_complete:A_BomoBR_DN30770_c0_g1_i14
530bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
1025 O_BomoBR100923_complete:A_BomoBR_DN30770_c0_g1_i14
128bp
1026 O_BomoBR100924_complete:A_BomoBR_DN30770_c0_g1_i15
128bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0030496 C midbody
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
1027 O_BomoBR100925_complete:A_BomoBR_DN30770_c0_g1_i16
2257bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
1028 O_BomoBR100926_complete:A_BomoBR_DN30770_c0_g1_i16
128bp
1029 O_BomoBR100927_complete:A_BomoBR_DN30770_c0_g1_i16
118bp
1030 O_BomoBR100928_complete:A_BomoBR_DN30770_c0_g1_i17
633bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
1031 O_BomoBR100929_5prime_partial:A_BomoBR_DN30770_c0_g1_i18
653bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
1032 O_BomoBR10092_complete:A_BomoBR_DN31320_c0_g4_i2
363bp
 FIT_family_protein_CG10671_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0034389 P lipid droplet organization
1033 O_BomoBR100930_complete:A_BomoBR_DN30770_c0_g1_i18
128bp
1034 O_BomoBR100931_5prime_partial:A_BomoBR_DN30770_c0_g1_i19
383bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
1035 O_BomoBR100932_3prime_partial:A_BomoBR_DN30770_c0_g1_i20
176bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
1036 O_BomoBR100933_internal:A_BomoBR_DN30790_c4_g1_i11
99bp
hCG1814203_[Homo_sapiens]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1037 O_BomoBR100934_complete:A_BomoBR_DN30739_c2_g2_i1
159bp
 mitochondrial_glutamate_carrier_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1038 O_BomoBR100935_complete:A_BomoBR_DN30739_c2_g2_i2
315bp
 mitochondrial_glutamate_carrier_1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005313 F L-glutamate transmembrane transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0015813 P L-glutamate transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0089711 P L-glutamate transmembrane transport
1039 O_BomoBR100936_complete:A_BomoBR_DN30739_c3_g1_i1
1001bp
 intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
1040 O_BomoBR100937_complete:A_BomoBR_DN30739_c3_g1_i1
116bp
1041 O_BomoBR100938_complete:A_BomoBR_DN30739_c3_g1_i9
694bp
 intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
1042 O_BomoBR100939_complete:A_BomoBR_DN30739_c3_g1_i11
186bp
 probable_G-protein_coupled_receptor_Mth-like_5_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042594 P response to starvation
1043 O_BomoBR10093_complete:A_BomoBR_DN31395_c0_g1_i3
516bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
1044 O_BomoBR100940_3prime_partial:A_BomoBR_DN30739_c3_g1_i12
1005bp
 intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
1045 O_BomoBR100941_complete:A_BomoBR_DN30739_c3_g1_i12
116bp
1046 O_BomoBR100942_5prime_partial:A_BomoBR_DN30739_c3_g1_i13
410bp
 probable_G-protein_coupled_receptor_Mth-like_5_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042594 P response to starvation
1047 O_BomoBR100943_complete:A_BomoBR_DN30739_c3_g1_i14
923bp
 intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
1048 O_BomoBR100944_complete:A_BomoBR_DN30739_c3_g1_i14
116bp
1049 O_BomoBR100945_complete:A_BomoBR_DN30739_c3_g1_i15
1436bp
 intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
1050 O_BomoBR100946_complete:A_BomoBR_DN30739_c3_g1_i15
116bp
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