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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
661 O_BomoOtmSK10596_5prime_partial:A_BomoOtmSK_comp13579_c0_seq2
132bp
662 O_BomoOtmSK10597_3prime_partial:A_BomoOtmSK_comp13579_c0_seq3
277bp
 ankyrin-3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007528 P neuromuscular junction development
GO:0008092 F cytoskeletal protein binding
GO:0008093 F cytoskeletal anchor activity
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0010650 P positive regulation of cell communication by electrical coupling
GO:0010765 P positive regulation of sodium ion transport
GO:0010960 P magnesium ion homeostasis
GO:0014704 C intercalated disc
GO:0014731 C spectrin-associated cytoskeleton
GO:0016020 C membrane
GO:0016529 C sarcoplasmic reticulum
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030315 C T-tubule
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030507 F spectrin binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0031594 C neuromuscular junction
GO:0033268 C node of Ranvier
GO:0034112 P positive regulation of homotypic cell-cell adhesion
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0043194 C axon initial segment
GO:0043266 P regulation of potassium ion transport
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045296 F cadherin binding
GO:0045838 P positive regulation of membrane potential
GO:0071286 P cellular response to magnesium ion
GO:0071709 P membrane assembly
GO:0072659 P protein localization to plasma membrane
GO:0072661 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:1900827 P positive regulation of membrane depolarization during cardiac muscle cell action potential
GO:1902260 P negative regulation of delayed rectifier potassium channel activity
GO:2000651 P positive regulation of sodium ion transmembrane transporter activity
GO:2001259 P positive regulation of cation channel activity
663 O_BomoOtmSK10598_complete:A_BomoOtmSK_comp13579_c0_seq3
140bp
 hypothetical_protein_ALC57_10359,_partial_[Trachymyrmex_cornetzi]
664 O_BomoOtmSK10599_5prime_partial:A_BomoOtmSK_comp13579_c0_seq3
132bp
665 O_BomoOtmSK1059_5prime_partial:A_BomoOtmSK_comp4512_c0_seq1
446bp
 myotubularin-related_protein_9_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0030234 F enzyme regulator activity
GO:0050790 P regulation of catalytic activity
666 O_BomoOtmSK105_3prime_partial:A_BomoOtmSK_comp405_c0_seq1
124bp
 rho_GTPase-activating_protein_11A_isoform_X2_[Bombyx_mori]
667 O_BomoOtmSK10600_internal:A_BomoOtmSK_comp13579_c0_seq4
614bp
 ankyrin-3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007528 P neuromuscular junction development
GO:0008092 F cytoskeletal protein binding
GO:0008093 F cytoskeletal anchor activity
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0010650 P positive regulation of cell communication by electrical coupling
GO:0010765 P positive regulation of sodium ion transport
GO:0010960 P magnesium ion homeostasis
GO:0014704 C intercalated disc
GO:0014731 C spectrin-associated cytoskeleton
GO:0016020 C membrane
GO:0016529 C sarcoplasmic reticulum
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030315 C T-tubule
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030507 F spectrin binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0031594 C neuromuscular junction
GO:0033268 C node of Ranvier
GO:0034112 P positive regulation of homotypic cell-cell adhesion
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0043194 C axon initial segment
GO:0043266 P regulation of potassium ion transport
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045296 F cadherin binding
GO:0045838 P positive regulation of membrane potential
GO:0071286 P cellular response to magnesium ion
GO:0071709 P membrane assembly
GO:0072659 P protein localization to plasma membrane
GO:0072661 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:1900827 P positive regulation of membrane depolarization during cardiac muscle cell action potential
GO:1902260 P negative regulation of delayed rectifier potassium channel activity
GO:2000651 P positive regulation of sodium ion transmembrane transporter activity
GO:2001259 P positive regulation of cation channel activity
668 O_BomoOtmSK10601_complete:A_BomoOtmSK_comp13579_c0_seq4
140bp
 hypothetical_protein_ALC57_10359,_partial_[Trachymyrmex_cornetzi]
669 O_BomoOtmSK10602_5prime_partial:A_BomoOtmSK_comp13579_c0_seq4
132bp
670 O_BomoOtmSK10603_complete:A_BomoOtmSK_comp13579_c0_seq4
119bp
 hypothetical_protein_MT325_m414R_[Paramecium_bursaria_chlorella_virus_MT325]
671 O_BomoOtmSK10604_5prime_partial:A_BomoOtmSK_comp13579_c0_seq4
113bp
672 O_BomoOtmSK10605_complete:A_BomoOtmSK_comp13580_c0_seq1
175bp
 cuticular_protein_RR-1_motif_45_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
673 O_BomoOtmSK10606_5prime_partial:A_BomoOtmSK_comp13581_c0_seq1
228bp
 uncharacterized_protein_LOC101744177_isoform_X3_[Bombyx_mori]
674 O_BomoOtmSK10607_3prime_partial:A_BomoOtmSK_comp13581_c0_seq1
111bp
675 O_BomoOtmSK10608_complete:A_BomoOtmSK_comp13582_c0_seq1
708bp
 mucin-5AC_isoform_X1_[Bombyx_mori]
676 O_BomoOtmSK10609_internal:A_BomoOtmSK_comp13583_c0_seq1
148bp
 zinc_finger_protein_502_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
677 O_BomoOtmSK1060_complete:A_BomoOtmSK_comp4514_c0_seq1
678bp
 ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
678 O_BomoOtmSK10610_3prime_partial:A_BomoOtmSK_comp13583_c0_seq2
120bp
 zinc_finger_protein_502_isoform_X2_[Bombyx_mori]
679 O_BomoOtmSK10611_complete:A_BomoOtmSK_comp13585_c0_seq1
399bp
 cyclin_dependent_kinase_9_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051726 P regulation of cell cycle
680 O_BomoOtmSK10612_complete:A_BomoOtmSK_comp13585_c0_seq1
100bp
681 O_BomoOtmSK10613_complete:A_BomoOtmSK_comp13586_c0_seq1
258bp
 proteasome_subunit_alpha_type-4_[Papilio_xuthus]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008233 F peptidase activity
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0019773 C proteasome core complex, alpha-subunit complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043488 P regulation of mRNA stability
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
682 O_BomoOtmSK10614_complete:A_BomoOtmSK_comp13587_c0_seq2
438bp
 uncharacterized_protein_LOC110377911_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0007605 P sensory perception of sound
GO:0031625 F ubiquitin protein ligase binding
683 O_BomoOtmSK10615_internal:A_BomoOtmSK_comp13590_c0_seq1
139bp
 nuclear_pore_complex_protein_Nup155_[Bombyx_mori]
GO:0000972 P transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006998 P nuclear envelope organization
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0036228 P protein localization to nuclear inner membrane
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:0086014 P atrial cardiac muscle cell action potential
GO:1900034 P regulation of cellular response to heat
684 O_BomoOtmSK10616_complete:A_BomoOtmSK_comp13592_c0_seq1
291bp
 CD63_antigen_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0009986 C cell surface
GO:0010008 C endosome membrane
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0030855 P epithelial cell differentiation
GO:0031226 C intrinsic component of plasma membrane
GO:0031902 C late endosome membrane
GO:0031904 C endosome lumen
GO:0032403 F protein-containing complex binding
GO:0032585 C multivesicular body membrane
GO:0034613 P cellular protein localization
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0043234 C protein-containing complex
GO:0043473 P pigmentation
GO:0045785 P positive regulation of cell adhesion
GO:0045807 P positive regulation of endocytosis
GO:0048757 P pigment granule maturation
GO:0050931 P pigment cell differentiation
GO:0070062 C extracellular exosome
GO:0097487 C multivesicular body, internal vesicle
GO:1900746 P regulation of vascular endothelial growth factor signaling pathway
GO:2000680 P obsolete regulation of rubidium ion transport
GO:2001046 P positive regulation of integrin-mediated signaling pathway
685 O_BomoOtmSK10617_5prime_partial:A_BomoOtmSK_comp13593_c0_seq1
333bp
 S-phase_kinase-associated_protein_2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051726 P regulation of cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0071460 P cellular response to cell-matrix adhesion
GO:1902916 P positive regulation of protein polyubiquitination
686 O_BomoOtmSK10618_3prime_partial:A_BomoOtmSK_comp13593_c0_seq1
198bp
687 O_BomoOtmSK10619_3prime_partial:A_BomoOtmSK_comp13594_c0_seq1
107bp
 WD_repeat-containing_protein_13_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:1904691 P negative regulation of type B pancreatic cell proliferation
GO:1990841 F promoter-specific chromatin binding
688 O_BomoOtmSK1061_complete:A_BomoOtmSK_comp4516_c0_seq1
662bp
 fasciclin-1_isoform_X4_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
689 O_BomoOtmSK10620_internal:A_BomoOtmSK_comp13594_c1_seq1
162bp
 WD_repeat-containing_protein_13_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
690 O_BomoOtmSK10621_5prime_partial:A_BomoOtmSK_comp13594_c1_seq1
147bp
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