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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
481 O_BomoOtmSK10433_3prime_partial:A_BomoOtmSK_comp13520_c1_seq1
116bp
 centromere/kinetochore_protein_zw10_[Bombyx_mori]
482 O_BomoOtmSK10434_5prime_partial:A_BomoOtmSK_comp13522_c0_seq1
502bp
 L-dopachrome_tautomerase_yellow-f2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0031640 P killing of cells of another organism
GO:0042742 P defense response to bacterium
GO:0048650 P caste determination, influence by environmental factors
GO:0050829 P defense response to Gram-negative bacterium
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
483 O_BomoOtmSK10435_complete:A_BomoOtmSK_comp13523_c0_seq1
254bp
 ribosomal_protein_S6_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
484 O_BomoOtmSK10436_5prime_partial:A_BomoOtmSK_comp13524_c0_seq1
179bp
 lamin-C_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0005102 F signaling receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005638 C lamin filament
GO:0005652 C nuclear lamina
GO:0005811 C lipid droplet
GO:0005813 C centrosome
GO:0005875 C microtubule associated complex
GO:0005882 C intermediate filament
GO:0006342 P heterochromatin assembly
GO:0006997 P nucleus organization
GO:0006998 P nuclear envelope organization
GO:0007084 P mitotic nuclear membrane reassembly
GO:0007097 P nuclear migration
GO:0007283 P spermatogenesis
GO:0007417 P central nervous system development
GO:0007430 P terminal branching, open tracheal system
GO:0007569 P cell aging
GO:0008285 P negative regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0016020 C membrane
GO:0031081 P nuclear pore localization
GO:0035262 P gonad morphogenesis
GO:0040003 P chitin-based cuticle development
GO:0046331 P lateral inhibition
GO:0048546 P digestive tract morphogenesis
GO:0050777 P negative regulation of immune response
GO:0051297 P centrosome cycle
GO:0070870 P obsolete heterochromatin maintenance
GO:0071763 P nuclear membrane organization
GO:0072686 C mitotic spindle
GO:0090435 P protein localization to nuclear envelope
485 O_BomoOtmSK10437_5prime_partial:A_BomoOtmSK_comp13524_c0_seq2
210bp
 muscular_protein_20_[Bombyx_mori]
GO:0003779 F actin binding
GO:0007155 P cell adhesion
GO:0007520 P myoblast fusion
GO:0008360 P regulation of cell shape
GO:0043292 C contractile fiber
GO:1901739 P regulation of myoblast fusion
486 O_BomoOtmSK10438_5prime_partial:A_BomoOtmSK_comp13524_c0_seq2
179bp
 lamin-C_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0005102 F signaling receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005638 C lamin filament
GO:0005652 C nuclear lamina
GO:0005811 C lipid droplet
GO:0005813 C centrosome
GO:0005875 C microtubule associated complex
GO:0005882 C intermediate filament
GO:0006342 P heterochromatin assembly
GO:0006997 P nucleus organization
GO:0006998 P nuclear envelope organization
GO:0007084 P mitotic nuclear membrane reassembly
GO:0007097 P nuclear migration
GO:0007283 P spermatogenesis
GO:0007417 P central nervous system development
GO:0007430 P terminal branching, open tracheal system
GO:0007569 P cell aging
GO:0008285 P negative regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0016020 C membrane
GO:0031081 P nuclear pore localization
GO:0035262 P gonad morphogenesis
GO:0040003 P chitin-based cuticle development
GO:0046331 P lateral inhibition
GO:0048546 P digestive tract morphogenesis
GO:0050777 P negative regulation of immune response
GO:0051297 P centrosome cycle
GO:0070870 P obsolete heterochromatin maintenance
GO:0071763 P nuclear membrane organization
GO:0072686 C mitotic spindle
GO:0090435 P protein localization to nuclear envelope
487 O_BomoOtmSK10439_complete:A_BomoOtmSK_comp13524_c0_seq2
103bp
488 O_BomoOtmSK1043_3prime_partial:A_BomoOtmSK_comp4474_c0_seq2
270bp
 zinc_finger_protein_628_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
489 O_BomoOtmSK10440_5prime_partial:A_BomoOtmSK_comp13524_c0_seq3
179bp
 lamin-C_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0005102 F signaling receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005638 C lamin filament
GO:0005652 C nuclear lamina
GO:0005811 C lipid droplet
GO:0005813 C centrosome
GO:0005875 C microtubule associated complex
GO:0005882 C intermediate filament
GO:0006342 P heterochromatin assembly
GO:0006997 P nucleus organization
GO:0006998 P nuclear envelope organization
GO:0007084 P mitotic nuclear membrane reassembly
GO:0007097 P nuclear migration
GO:0007283 P spermatogenesis
GO:0007417 P central nervous system development
GO:0007430 P terminal branching, open tracheal system
GO:0007569 P cell aging
GO:0008285 P negative regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0016020 C membrane
GO:0031081 P nuclear pore localization
GO:0035262 P gonad morphogenesis
GO:0040003 P chitin-based cuticle development
GO:0046331 P lateral inhibition
GO:0048546 P digestive tract morphogenesis
GO:0050777 P negative regulation of immune response
GO:0051297 P centrosome cycle
GO:0070870 P obsolete heterochromatin maintenance
GO:0071763 P nuclear membrane organization
GO:0072686 C mitotic spindle
GO:0090435 P protein localization to nuclear envelope
490 O_BomoOtmSK10441_5prime_partial:A_BomoOtmSK_comp13524_c0_seq4
179bp
 lamin-C_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0005102 F signaling receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005638 C lamin filament
GO:0005652 C nuclear lamina
GO:0005811 C lipid droplet
GO:0005813 C centrosome
GO:0005875 C microtubule associated complex
GO:0005882 C intermediate filament
GO:0006342 P heterochromatin assembly
GO:0006997 P nucleus organization
GO:0006998 P nuclear envelope organization
GO:0007084 P mitotic nuclear membrane reassembly
GO:0007097 P nuclear migration
GO:0007283 P spermatogenesis
GO:0007417 P central nervous system development
GO:0007430 P terminal branching, open tracheal system
GO:0007569 P cell aging
GO:0008285 P negative regulation of cell population proliferation
GO:0008344 P adult locomotory behavior
GO:0016020 C membrane
GO:0031081 P nuclear pore localization
GO:0035262 P gonad morphogenesis
GO:0040003 P chitin-based cuticle development
GO:0046331 P lateral inhibition
GO:0048546 P digestive tract morphogenesis
GO:0050777 P negative regulation of immune response
GO:0051297 P centrosome cycle
GO:0070870 P obsolete heterochromatin maintenance
GO:0071763 P nuclear membrane organization
GO:0072686 C mitotic spindle
GO:0090435 P protein localization to nuclear envelope
491 O_BomoOtmSK10442_complete:A_BomoOtmSK_comp13524_c0_seq4
120bp
 ribosomal_protein_S25_[Bombyx_mori]
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
492 O_BomoOtmSK10443_internal:A_BomoOtmSK_comp13525_c0_seq1
136bp
 unnamed_protein_product,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
493 O_BomoOtmSK10444_internal:A_BomoOtmSK_comp13525_c0_seq1
135bp
 hypothetical_protein_RF55_12426_[Lasius_niger]
494 O_BomoOtmSK10445_complete:A_BomoOtmSK_comp13526_c0_seq1
289bp
 uncharacterized_protein_LOC101741291_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0031398 P positive regulation of protein ubiquitination
GO:0060510 P type II pneumocyte differentiation
GO:1901216 P positive regulation of neuron death
495 O_BomoOtmSK10446_complete:A_BomoOtmSK_comp13526_c0_seq2
283bp
 uncharacterized_protein_LOC101741291_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0031398 P positive regulation of protein ubiquitination
GO:0060510 P type II pneumocyte differentiation
GO:1901216 P positive regulation of neuron death
496 O_BomoOtmSK10447_complete:A_BomoOtmSK_comp13527_c0_seq2
344bp
 RNA-binding_protein_lark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
497 O_BomoOtmSK10448_complete:A_BomoOtmSK_comp13527_c0_seq2
115bp
498 O_BomoOtmSK10449_complete:A_BomoOtmSK_comp13527_c0_seq3
247bp
 RNA-binding_protein_lark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
499 O_BomoOtmSK1044_3prime_partial:A_BomoOtmSK_comp4476_c0_seq1
203bp
 ankyrin_repeat_domain-containing_protein_13D-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
500 O_BomoOtmSK10450_complete:A_BomoOtmSK_comp13527_c0_seq3
128bp
 RNA-binding_protein_lark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
501 O_BomoOtmSK10451_complete:A_BomoOtmSK_comp13527_c0_seq4
247bp
 RNA-binding_protein_lark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
502 O_BomoOtmSK10452_complete:A_BomoOtmSK_comp13527_c0_seq4
128bp
 RNA-binding_protein_lark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
503 O_BomoOtmSK10453_complete:A_BomoOtmSK_comp13527_c0_seq5
344bp
 RNA-binding_protein_lark_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
504 O_BomoOtmSK10454_complete:A_BomoOtmSK_comp13527_c0_seq5
115bp
505 O_BomoOtmSK10455_5prime_partial:A_BomoOtmSK_comp13528_c0_seq1
479bp
 AF4/FMR2_family_member_3-like_isoform_X2_[Helicoverpa_armigera]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007366 P periodic partitioning by pair rule gene
GO:0008361 P regulation of cell size
GO:0032368 P regulation of lipid transport
GO:0042051 P compound eye photoreceptor development
GO:0051493 P regulation of cytoskeleton organization
506 O_BomoOtmSK10456_3prime_partial:A_BomoOtmSK_comp13528_c0_seq1
183bp
507 O_BomoOtmSK10457_complete:A_BomoOtmSK_comp13528_c0_seq1
155bp
508 O_BomoOtmSK10458_complete:A_BomoOtmSK_comp13529_c0_seq1
517bp
 alanine_aminotransferase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004021 F L-alanine:2-oxoglutarate aminotransferase activity
GO:0006103 P 2-oxoglutarate metabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0042851 P L-alanine metabolic process
GO:0042853 P L-alanine catabolic process
509 O_BomoOtmSK10459_complete:A_BomoOtmSK_comp13529_c0_seq1
159bp
510 O_BomoOtmSK1045_complete:A_BomoOtmSK_comp4477_c0_seq1
368bp
 alpha-esterase_13_precursor_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0007612 P learning
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0035176 P social behavior
GO:0042043 F neurexin family protein binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050804 P modulation of chemical synaptic transmission
GO:0050808 P synapse organization
GO:0050839 F cell adhesion molecule binding
GO:0052689 F carboxylic ester hydrolase activity
GO:0071625 P vocalization behavior
GO:0097110 F scaffold protein binding
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