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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4681 O_BomoOtmSK14213_complete:A_BomoOtmSK_comp14895_c0_seq3
2167bp
 uncharacterized_protein_LOC101738347_isoform_X2_[Bombyx_mori]
4682 O_BomoOtmSK14214_complete:A_BomoOtmSK_comp14895_c0_seq3
217bp
4683 O_BomoOtmSK14215_complete:A_BomoOtmSK_comp14895_c0_seq3
179bp
4684 O_BomoOtmSK14216_complete:A_BomoOtmSK_comp14895_c0_seq3
168bp
4685 O_BomoOtmSK14217_complete:A_BomoOtmSK_comp14895_c0_seq3
151bp
4686 O_BomoOtmSK14218_complete:A_BomoOtmSK_comp14895_c0_seq3
127bp
4687 O_BomoOtmSK14219_complete:A_BomoOtmSK_comp14895_c0_seq4
1302bp
 uncharacterized_protein_LOC101738347_isoform_X2_[Bombyx_mori]
4688 O_BomoOtmSK1421_5prime_partial:A_BomoOtmSK_comp4974_c0_seq1
567bp
 para-nitrobenzyl_esterase_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
4689 O_BomoOtmSK14220_complete:A_BomoOtmSK_comp14895_c0_seq4
179bp
4690 O_BomoOtmSK14221_complete:A_BomoOtmSK_comp14895_c0_seq4
168bp
4691 O_BomoOtmSK14222_complete:A_BomoOtmSK_comp14895_c0_seq4
151bp
4692 O_BomoOtmSK14223_3prime_partial:A_BomoOtmSK_comp14896_c0_seq1
443bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003779 F actin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005874 C microtubule
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030307 P positive regulation of cell growth
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0034644 P cellular response to UV
GO:0043014 F alpha-tubulin binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0070914 P UV-damage excision repair
GO:0071479 P cellular response to ionizing radiation
GO:2000045 P regulation of G1/S transition of mitotic cell cycle
4693 O_BomoOtmSK14224_5prime_partial:A_BomoOtmSK_comp14896_c0_seq1
148bp
4694 O_BomoOtmSK14225_3prime_partial:A_BomoOtmSK_comp14897_c0_seq1
754bp
 TBC1_domain_family_member_1_isoform_X3_[Helicoverpa_armigera]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030659 C cytoplasmic vesicle membrane
GO:0031338 P regulation of vesicle fusion
GO:0031339 P negative regulation of vesicle fusion
GO:0031988 C vesicle
GO:0032869 P cellular response to insulin stimulus
GO:0061024 P membrane organization
GO:0070062 C extracellular exosome
GO:0090630 P activation of GTPase activity
4695 O_BomoOtmSK14226_3prime_partial:A_BomoOtmSK_comp14897_c0_seq2
725bp
 PREDICTED:_TBC1_domain_family_member_4_isoform_X1_[Amyelois_transitella]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030659 C cytoplasmic vesicle membrane
GO:0031338 P regulation of vesicle fusion
GO:0031339 P negative regulation of vesicle fusion
GO:0031988 C vesicle
GO:0032869 P cellular response to insulin stimulus
GO:0061024 P membrane organization
GO:0070062 C extracellular exosome
GO:0090630 P activation of GTPase activity
4696 O_BomoOtmSK14227_complete:A_BomoOtmSK_comp14899_c0_seq1
126bp
 multifunctional_methyltransferase_subunit_TRM112-like_protein_[Bombyx_mori]
GO:0008276 F protein methyltransferase activity
GO:0018364 P peptidyl-glutamine methylation
GO:0030488 P tRNA methylation
GO:0043234 C protein-containing complex
GO:0070062 C extracellular exosome
GO:0070476 P rRNA (guanine-N7)-methylation
4697 O_BomoOtmSK14228_complete:A_BomoOtmSK_comp14900_c0_seq1
340bp
 uncharacterized_protein_LOC101745604_isoform_X1_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010792 P DNA double-strand break processing involved in repair via single-strand annealing
GO:0034599 P cellular response to oxidative stress
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045002 P double-strand break repair via single-strand annealing
GO:2000819 P regulation of nucleotide-excision repair
4698 O_BomoOtmSK14229_5prime_partial:A_BomoOtmSK_comp14902_c0_seq1
323bp
 putative_nuclease_HARBI1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4699 O_BomoOtmSK1422_5prime_partial:A_BomoOtmSK_comp4975_c0_seq1
114bp
4700 O_BomoOtmSK14230_internal:A_BomoOtmSK_comp14902_c0_seq2
406bp
 putative_nuclease_HARBI1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4701 O_BomoOtmSK14231_complete:A_BomoOtmSK_comp14902_c0_seq3
174bp
 putative_nuclease_HARBI1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4702 O_BomoOtmSK14232_5prime_partial:A_BomoOtmSK_comp14902_c0_seq3
142bp
 putative_nuclease_HARBI1_[Bombyx_mori]
4703 O_BomoOtmSK14233_3prime_partial:A_BomoOtmSK_comp14902_c0_seq4
257bp
 putative_nuclease_HARBI1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4704 O_BomoOtmSK14234_5prime_partial:A_BomoOtmSK_comp14902_c0_seq4
142bp
 putative_nuclease_HARBI1_[Bombyx_mori]
4705 O_BomoOtmSK14235_complete:A_BomoOtmSK_comp14903_c0_seq1
253bp
 cAMP-specific_3',5'-cyclic_phosphodiesterase_isoform_X1_[Bombyx_mori]
4706 O_BomoOtmSK14236_complete:A_BomoOtmSK_comp14903_c0_seq1
117bp
 hypothetical_protein_KGM_207605_[Danaus_plexippus_plexippus]
4707 O_BomoOtmSK14237_complete:A_BomoOtmSK_comp14904_c0_seq1
935bp
 uncharacterized_protein_LOC101742952_[Bombyx_mori]
GO:0003714 F transcription corepressor activity
GO:0003824 F catalytic activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008152 P metabolic process
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0035064 F methylated histone binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
4708 O_BomoOtmSK14238_complete:A_BomoOtmSK_comp14904_c0_seq2
893bp
 uncharacterized_protein_LOC101742952_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0035064 F methylated histone binding
4709 O_BomoOtmSK14239_complete:A_BomoOtmSK_comp14904_c0_seq2
125bp
 uncharacterized_protein_LOC101742806_[Bombyx_mori]
4710 O_BomoOtmSK1423_5prime_partial:A_BomoOtmSK_comp4984_c0_seq1
350bp
 anion_exchange_protein_3_isoform_X3_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005215 F transporter activity
GO:0005452 F inorganic anion exchanger activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006821 P chloride transport
GO:0008022 F protein C-terminus binding
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015108 F chloride transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0019899 F enzyme binding
GO:0030018 C Z disc
GO:0030506 F ankyrin binding
GO:0030863 C cortical cytoskeleton
GO:0042803 F protein homodimerization activity
GO:0051453 P regulation of intracellular pH
GO:0070062 C extracellular exosome
GO:0072562 C blood microparticle
GO:0098656 P anion transmembrane transport
GO:1902476 P chloride transmembrane transport
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