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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3931 O_BomoOtmSK13539_complete:A_BomoOtmSK_comp14708_c1_seq1
170bp
3932 O_BomoOtmSK1353_3prime_partial:A_BomoOtmSK_comp4892_c0_seq1
279bp
 kinase_D-interacting_substrate_of_220_kDa_isoform_X1_[Bombyx_mori]
GO:0000186 P obsolete activation of MAPKK activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0030165 F PDZ domain binding
GO:0038180 P nerve growth factor signaling pathway
GO:0043234 C protein-containing complex
GO:1990090 P cellular response to nerve growth factor stimulus
3933 O_BomoOtmSK13540_complete:A_BomoOtmSK_comp14709_c0_seq1
103bp
3934 O_BomoOtmSK13541_complete:A_BomoOtmSK_comp14710_c0_seq1
212bp
 class_A_basic_helix-loop-helix_protein_15-like_[Bombyx_mori]
GO:0002793 P positive regulation of peptide secretion
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046887 P positive regulation of hormone secretion
GO:0046983 F protein dimerization activity
GO:0061101 P neuroendocrine cell differentiation
3935 O_BomoOtmSK13542_complete:A_BomoOtmSK_comp14711_c0_seq1
821bp
 uncharacterized_protein_LOC101739363_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
3936 O_BomoOtmSK13543_complete:A_BomoOtmSK_comp14711_c0_seq1
137bp
3937 O_BomoOtmSK13544_complete:A_BomoOtmSK_comp14711_c0_seq1
134bp
3938 O_BomoOtmSK13545_complete:A_BomoOtmSK_comp14711_c1_seq1
189bp
 peroxiredoxin_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0001016 F RNA polymerase III transcription regulatory region sequence-specific DNA binding
GO:0004601 F peroxidase activity
GO:0005102 F signaling receptor binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006954 P inflammatory response
GO:0006979 P response to oxidative stress
GO:0008379 F thioredoxin peroxidase activity
GO:0016209 F antioxidant activity
GO:0016480 P negative regulation of transcription by RNA polymerase III
GO:0016491 F oxidoreductase activity
GO:0031410 C cytoplasmic vesicle
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0034614 P cellular response to reactive oxygen species
GO:0042744 P hydrogen peroxide catabolic process
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046983 F protein dimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0051354 P negative regulation of oxidoreductase activity
GO:0051920 F peroxiredoxin activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060785 P regulation of apoptosis involved in tissue homeostasis
GO:0070062 C extracellular exosome
GO:0070995 P NADPH oxidation
GO:0072541 F peroxynitrite reductase activity
GO:0098869 P cellular oxidant detoxification
GO:2001057 P reactive nitrogen species metabolic process
3939 O_BomoOtmSK13546_complete:A_BomoOtmSK_comp14711_c1_seq3
189bp
 peroxiredoxin_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0001016 F RNA polymerase III transcription regulatory region sequence-specific DNA binding
GO:0004601 F peroxidase activity
GO:0005102 F signaling receptor binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006954 P inflammatory response
GO:0006979 P response to oxidative stress
GO:0008379 F thioredoxin peroxidase activity
GO:0016209 F antioxidant activity
GO:0016480 P negative regulation of transcription by RNA polymerase III
GO:0016491 F oxidoreductase activity
GO:0031410 C cytoplasmic vesicle
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0034614 P cellular response to reactive oxygen species
GO:0042744 P hydrogen peroxide catabolic process
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046983 F protein dimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0051354 P negative regulation of oxidoreductase activity
GO:0051920 F peroxiredoxin activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060785 P regulation of apoptosis involved in tissue homeostasis
GO:0070062 C extracellular exosome
GO:0070995 P NADPH oxidation
GO:0072541 F peroxynitrite reductase activity
GO:0098869 P cellular oxidant detoxification
GO:2001057 P reactive nitrogen species metabolic process
3940 O_BomoOtmSK13547_5prime_partial:A_BomoOtmSK_comp14711_c2_seq1
100bp
 E3_ubiquitin-protein_ligase_MYLIP_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007399 P nervous system development
GO:0008092 F cytoskeletal protein binding
GO:0008270 F zinc ion binding
GO:0010989 P negative regulation of low-density lipoprotein particle clearance
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019898 C extrinsic component of membrane
GO:0031648 P protein destabilization
GO:0032803 P regulation of low-density lipoprotein particle receptor catabolic process
GO:0042632 P cholesterol homeostasis
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
3941 O_BomoOtmSK13548_3prime_partial:A_BomoOtmSK_comp14712_c0_seq1
313bp
 4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Bombyx_mori]
GO:0002083 F 4-hydroxybenzoate decaprenyltransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0047293 F 4-hydroxybenzoate nonaprenyltransferase activity
3942 O_BomoOtmSK13549_complete:A_BomoOtmSK_comp14713_c0_seq1
752bp
 uncharacterized_protein_LOC101737353_[Bombyx_mori]
3943 O_BomoOtmSK1354_3prime_partial:A_BomoOtmSK_comp4892_c0_seq2
173bp
 kinase_D-interacting_substrate_of_220_kDa_isoform_X3_[Bombyx_mori]
GO:0000186 P obsolete activation of MAPKK activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0030165 F PDZ domain binding
GO:0038180 P nerve growth factor signaling pathway
GO:0043234 C protein-containing complex
GO:1990090 P cellular response to nerve growth factor stimulus
3944 O_BomoOtmSK13550_3prime_partial:A_BomoOtmSK_comp14715_c0_seq1
207bp
 PREDICTED:_uncharacterized_protein_LOC105388840_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3945 O_BomoOtmSK13551_5prime_partial:A_BomoOtmSK_comp14716_c1_seq1
100bp
3946 O_BomoOtmSK13552_complete:A_BomoOtmSK_comp14717_c0_seq1
332bp
 lactate_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004459 F L-lactate dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0055114 P obsolete oxidation-reduction process
3947 O_BomoOtmSK13553_complete:A_BomoOtmSK_comp14717_c0_seq1
203bp
3948 O_BomoOtmSK13554_complete:A_BomoOtmSK_comp14717_c0_seq2
347bp
 lactate_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004459 F L-lactate dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0055114 P obsolete oxidation-reduction process
3949 O_BomoOtmSK13555_complete:A_BomoOtmSK_comp14717_c0_seq2
203bp
3950 O_BomoOtmSK13556_complete:A_BomoOtmSK_comp14718_c0_seq1
356bp
 replication_factor_C_subunit_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0016887 F ATP hydrolysis activity
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:0046683 P response to organophosphorus
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
3951 O_BomoOtmSK13557_complete:A_BomoOtmSK_comp14721_c0_seq1
313bp
 farnesoic_acid_O-methyltransferase_[Bombyx_mori]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
3952 O_BomoOtmSK13558_complete:A_BomoOtmSK_comp14721_c0_seq1
116bp
3953 O_BomoOtmSK13559_5prime_partial:A_BomoOtmSK_comp14721_c0_seq1
106bp
3954 O_BomoOtmSK1355_5prime_partial:A_BomoOtmSK_comp4894_c0_seq1
133bp
 CUGBP_Elav-like_family_member_1_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
3955 O_BomoOtmSK13560_complete:A_BomoOtmSK_comp14721_c0_seq2
459bp
 uncharacterized_protein_LOC101739845_[Bombyx_mori]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
3956 O_BomoOtmSK13561_complete:A_BomoOtmSK_comp14721_c0_seq2
128bp
3957 O_BomoOtmSK13562_5prime_partial:A_BomoOtmSK_comp14721_c0_seq2
106bp
3958 O_BomoOtmSK13563_complete:A_BomoOtmSK_comp14723_c0_seq1
396bp
 UDP-N-acetylglucosamine--dolichyl-phosphate_N-acetylglucosaminephosphotransferase_isoform_X1_[Bombyx_mori]
GO:0003975 F UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity
GO:0003976 F UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006047 P UDP-N-acetylglucosamine metabolic process
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0008963 F phospho-N-acetylmuramoyl-pentapeptide-transferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019348 P dolichol metabolic process
GO:0019408 P dolichol biosynthetic process
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0051259 P protein complex oligomerization
3959 O_BomoOtmSK13564_complete:A_BomoOtmSK_comp14724_c0_seq1
172bp
 uncharacterized_protein_LOC101737900_[Bombyx_mori]
3960 O_BomoOtmSK13565_complete:A_BomoOtmSK_comp14726_c0_seq1
105bp
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