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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
211 O_BomoOtmSK10190_5prime_partial:A_BomoOtmSK_comp13453_c0_seq1
165bp
 uncharacterized_protein_LOC101741453_[Bombyx_mori]
212 O_BomoOtmSK10191_complete:A_BomoOtmSK_comp13453_c0_seq2
149bp
 uncharacterized_protein_LOC101741453_[Bombyx_mori]
213 O_BomoOtmSK10192_complete:A_BomoOtmSK_comp13453_c0_seq3
149bp
 uncharacterized_protein_LOC101741453_[Bombyx_mori]
214 O_BomoOtmSK10193_complete:A_BomoOtmSK_comp13453_c0_seq4
149bp
 uncharacterized_protein_LOC101741453_[Bombyx_mori]
215 O_BomoOtmSK10194_complete:A_BomoOtmSK_comp13455_c0_seq1
191bp
 signal_sequence_receptor_beta_subunit_precursor_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006613 P cotranslational protein targeting to membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
216 O_BomoOtmSK10195_complete:A_BomoOtmSK_comp13455_c0_seq1
107bp
217 O_BomoOtmSK10196_complete:A_BomoOtmSK_comp13455_c0_seq2
191bp
 signal_sequence_receptor_beta_subunit_precursor_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006613 P cotranslational protein targeting to membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
218 O_BomoOtmSK10197_complete:A_BomoOtmSK_comp13455_c0_seq2
107bp
219 O_BomoOtmSK10198_internal:A_BomoOtmSK_comp13456_c0_seq1
116bp
 microtubule-associated_protein_futsch_[Bombyx_mori]
220 O_BomoOtmSK10199_internal:A_BomoOtmSK_comp13456_c0_seq1
116bp
221 O_BomoOtmSK1019_3prime_partial:A_BomoOtmSK_comp4444_c0_seq1
325bp
 probable_ATP-dependent_RNA_helicase_DHX35_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
222 O_BomoOtmSK101_3prime_partial:A_BomoOtmSK_comp399_c0_seq1
135bp
 putative_uncharacterized_protein_DDB_G0290521_[Bombyx_mori]
223 O_BomoOtmSK10200_internal:A_BomoOtmSK_comp13456_c0_seq2
99bp
 microtubule-associated_protein_futsch_[Bombyx_mori]
224 O_BomoOtmSK10201_internal:A_BomoOtmSK_comp13456_c0_seq2
99bp
225 O_BomoOtmSK10202_5prime_partial:A_BomoOtmSK_comp13456_c0_seq3
3225bp
 microtubule-associated_protein_futsch-like_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008017 F microtubule binding
GO:0008088 P axo-dendritic transport
GO:0008355 P olfactory learning
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015630 C microtubule cytoskeleton
GO:0019900 F kinase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0043524 P negative regulation of neuron apoptotic process
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0060052 P neurofilament cytoskeleton organization
GO:1901215 P negative regulation of neuron death
226 O_BomoOtmSK10203_complete:A_BomoOtmSK_comp13456_c0_seq3
197bp
227 O_BomoOtmSK10204_complete:A_BomoOtmSK_comp13456_c0_seq3
176bp
228 O_BomoOtmSK10205_3prime_partial:A_BomoOtmSK_comp13456_c0_seq3
174bp
229 O_BomoOtmSK10206_complete:A_BomoOtmSK_comp13456_c0_seq3
155bp
230 O_BomoOtmSK10207_complete:A_BomoOtmSK_comp13456_c0_seq3
131bp
231 O_BomoOtmSK10208_complete:A_BomoOtmSK_comp13456_c0_seq3
129bp
232 O_BomoOtmSK10209_complete:A_BomoOtmSK_comp13456_c0_seq3
102bp
233 O_BomoOtmSK1020_complete:A_BomoOtmSK_comp4445_c0_seq2
412bp
 extra_sex_combs_[Bombyx_mori]
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0042802 F identical protein binding
GO:0045120 C pronucleus
GO:0061087 P positive regulation of histone H3-K27 methylation
234 O_BomoOtmSK10210_internal:A_BomoOtmSK_comp13457_c0_seq3
129bp
235 O_BomoOtmSK10211_5prime_partial:A_BomoOtmSK_comp13457_c0_seq3
109bp
 probable_aminopeptidase_NPEPL1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0019538 P protein metabolic process
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
236 O_BomoOtmSK10212_5prime_partial:A_BomoOtmSK_comp13457_c0_seq4
152bp
237 O_BomoOtmSK10213_5prime_partial:A_BomoOtmSK_comp13457_c0_seq4
107bp
 probable_aminopeptidase_NPEPL1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0019538 P protein metabolic process
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
238 O_BomoOtmSK10214_complete:A_BomoOtmSK_comp13458_c0_seq1
171bp
 thymosin_isoform_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
239 O_BomoOtmSK10215_complete:A_BomoOtmSK_comp13458_c0_seq2
133bp
 thymosin_isoform_2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
240 O_BomoOtmSK10216_complete:A_BomoOtmSK_comp13458_c0_seq3
171bp
 thymosin_isoform_X3_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
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