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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
151 O_BomoOtmSK10136_complete:A_BomoOtmSK_comp13441_c0_seq5
119bp
152 O_BomoOtmSK10137_3prime_partial:A_BomoOtmSK_comp13441_c0_seq6
657bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
153 O_BomoOtmSK10138_5prime_partial:A_BomoOtmSK_comp13441_c0_seq6
136bp
154 O_BomoOtmSK10139_complete:A_BomoOtmSK_comp13441_c0_seq6
119bp
155 O_BomoOtmSK1013_3prime_partial:A_BomoOtmSK_comp4430_c0_seq1
290bp
 ataxin-2-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0009994 P oocyte differentiation
GO:0022416 P chaeta development
GO:0030833 P regulation of actin filament polymerization
GO:0048749 P compound eye development
156 O_BomoOtmSK10140_3prime_partial:A_BomoOtmSK_comp13441_c0_seq9
389bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
157 O_BomoOtmSK10141_5prime_partial:A_BomoOtmSK_comp13441_c0_seq9
136bp
158 O_BomoOtmSK10142_complete:A_BomoOtmSK_comp13441_c0_seq9
119bp
159 O_BomoOtmSK10143_3prime_partial:A_BomoOtmSK_comp13441_c0_seq10
389bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
160 O_BomoOtmSK10144_5prime_partial:A_BomoOtmSK_comp13441_c0_seq10
136bp
161 O_BomoOtmSK10145_complete:A_BomoOtmSK_comp13441_c0_seq10
119bp
162 O_BomoOtmSK10146_3prime_partial:A_BomoOtmSK_comp13441_c0_seq11
657bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
163 O_BomoOtmSK10147_5prime_partial:A_BomoOtmSK_comp13441_c0_seq11
136bp
164 O_BomoOtmSK10148_complete:A_BomoOtmSK_comp13441_c0_seq11
119bp
165 O_BomoOtmSK10149_3prime_partial:A_BomoOtmSK_comp13441_c0_seq12
657bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
166 O_BomoOtmSK1014_5prime_partial:A_BomoOtmSK_comp4430_c0_seq1
156bp
167 O_BomoOtmSK10150_5prime_partial:A_BomoOtmSK_comp13441_c0_seq12
136bp
168 O_BomoOtmSK10151_complete:A_BomoOtmSK_comp13441_c0_seq12
119bp
169 O_BomoOtmSK10152_5prime_partial:A_BomoOtmSK_comp13442_c0_seq1
265bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
170 O_BomoOtmSK10153_complete:A_BomoOtmSK_comp13442_c0_seq2
668bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
171 O_BomoOtmSK10154_complete:A_BomoOtmSK_comp13442_c0_seq2
132bp
172 O_BomoOtmSK10155_5prime_partial:A_BomoOtmSK_comp13442_c0_seq3
265bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
173 O_BomoOtmSK10156_complete:A_BomoOtmSK_comp13442_c0_seq4
670bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
174 O_BomoOtmSK10157_complete:A_BomoOtmSK_comp13442_c0_seq4
123bp
175 O_BomoOtmSK10158_complete:A_BomoOtmSK_comp13442_c0_seq5
670bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
176 O_BomoOtmSK10159_complete:A_BomoOtmSK_comp13442_c0_seq5
123bp
177 O_BomoOtmSK1015_complete:A_BomoOtmSK_comp4430_c0_seq1
105bp
178 O_BomoOtmSK10160_complete:A_BomoOtmSK_comp13442_c0_seq6
668bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
179 O_BomoOtmSK10161_complete:A_BomoOtmSK_comp13442_c0_seq6
132bp
180 O_BomoOtmSK10162_complete:A_BomoOtmSK_comp13443_c0_seq1
193bp
 ribosomal_protein_L24_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0003735 F structural constituent of ribosome
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:1902626 P assembly of large subunit precursor of preribosome
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