SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/16228
No. Name
Length
Chromosome No./Scaffold Id
Scaffold Length
BLAST (vs nr) Gene ontology
9781 O_BomaMG24538_5prime_partial:A_BomaMG_comp172983_c0_seq1
162bp
minichromosome_maintenance_complex_component_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
9782 O_BomaMG24539_internal:A_BomaMG_comp173030_c0_seq1
173bp
PREDICTED:_LOW_QUALITY_PROTEIN:_cactin_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0009950 P dorsal/ventral axis specification
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
GO:0048812 P neuron projection morphogenesis
GO:0071013 C catalytic step 2 spliceosome
9783 O_BomaMG24541_internal:A_BomaMG_comp173036_c0_seq1
153bp
putative_aquarius_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
9784 O_BomaMG24542_3prime_partial:A_BomaMG_comp173187_c0_seq1
215bp
PREDICTED:_DNA_repair_protein_RAD52_homolog_[Papilio_machaon]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010792 P DNA double-strand break processing involved in repair via single-strand annealing
GO:0034599 P cellular response to oxidative stress
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045002 P double-strand break repair via single-strand annealing
GO:2000819 P regulation of nucleotide-excision repair
9785 O_BomaMG24544_internal:A_BomaMG_comp173238_c0_seq1
115bp
PREDICTED:_maternal_effect_protein_staufen_isoform_X2_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006403 P RNA localization
GO:0007017 P microtubule-based process
GO:0007275 P multicellular organism development
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007318 P pole plasm protein localization
GO:0007400 P neuroblast fate determination
GO:0007616 P long-term memory
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008298 P intracellular mRNA localization
GO:0008595 P anterior/posterior axis specification, embryo
GO:0009925 C basal plasma membrane
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016324 C apical plasma membrane
GO:0019094 P pole plasm mRNA localization
GO:0035418 P protein localization to synapse
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045177 C apical part of cell
GO:0045179 C apical cortex
GO:0045180 C basal cortex
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046011 P regulation of oskar mRNA translation
GO:0046012 P positive regulation of oskar mRNA translation
GO:0048477 P oogenesis
GO:0055059 P asymmetric neuroblast division
GO:0060293 C germ plasm
GO:0071212 C subsynaptic reticulum
9786 O_BomaMG24545_internal:A_BomaMG_comp173323_c0_seq1
128bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
9787 O_BomaMG2454_internal:A_BomaMG_comp14110_c0_seq1
220bp
PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]
9788 O_BomaMG24550_internal:A_BomaMG_comp173329_c0_seq1
118bp
PREDICTED:_fibrosin-1-like_protein_isoform_X1_[Bombyx_mori]
9789 O_BomaMG24551_5prime_partial:A_BomaMG_comp173362_c0_seq1
132bp
septin_and_tuftelin_interacting_protein_[Bombyx_mori]
GO:0000390 P spliceosomal complex disassembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071008 C U2-type post-mRNA release spliceosomal complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
9790 O_BomaMG24552_internal:A_BomaMG_comp173431_c0_seq1
572bp
PREDICTED:_histone-lysine_N-methyltransferase_trithorax-like_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0008023 C transcription elongation factor complex
GO:0008157 F protein phosphatase 1 binding
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008354 P germ cell migration
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0019233 P sensory perception of pain
GO:0032259 P methylation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0043966 P histone H3 acetylation
GO:0044212 F transcription cis-regulatory region binding
GO:0044665 C MLL1/2 complex
GO:0046872 F metal ion binding
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051568 P histone H3-K4 methylation
GO:2001020 P regulation of response to DNA damage stimulus
9791 O_BomaMG24553_internal:A_BomaMG_comp173553_c0_seq1
130bp
PREDICTED:_protein_Gawky_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0031047 P gene silencing by RNA
GO:0032880 P regulation of protein localization
GO:0035195 P gene silencing by miRNA
GO:0045475 P locomotor rhythm
9792 O_BomaMG24554_5prime_partial:A_BomaMG_comp173574_c0_seq1
122bp
PREDICTED:_probable_DNA_mismatch_repair_protein_Msh6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000287 F magnesium ion binding
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008340 P determination of adult lifespan
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0016032 P viral process
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032142 F single guanine insertion binding
GO:0032143 F single thymine insertion binding
GO:0032301 C MutSalpha complex
GO:0032357 F oxidized purine DNA binding
GO:0032405 F MutLalpha complex binding
GO:0035064 F methylated histone binding
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043570 P maintenance of DNA repeat elements
GO:0045190 P isotype switching
GO:0045830 P positive regulation of isotype switching
GO:0045910 P negative regulation of DNA recombination
GO:0051096 P positive regulation of helicase activity
GO:0097193 P intrinsic apoptotic signaling pathway
9793 O_BomaMG24555_complete:A_BomaMG_comp173705_c0_seq1
508bp
PREDICTED:_zinc_finger_protein_with_KRAB_and_SCAN_domains_8-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9794 O_BomaMG24557_3prime_partial:A_BomaMG_comp173757_c0_seq1
351bp
PREDICTED:_uncharacterized_protein_LOC106708597_[Papilio_machaon]
9795 O_BomaMG24558_complete:A_BomaMG_comp173757_c0_seq1
109bp
hypothetical_protein_JT06_13075_[Desulfobulbus_sp._Tol-SR]
9796 O_BomaMG24559_internal:A_BomaMG_comp173798_c0_seq1
337bp
PREDICTED:_histone_acetyltransferase_KAT7_[Amyelois_transitella]
GO:0000123 C histone acetyltransferase complex
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0043966 P histone H3 acetylation
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043983 P histone H4-K12 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0046872 F metal ion binding
GO:1900182 P positive regulation of protein localization to nucleus
9797 O_BomaMG24560_internal:A_BomaMG_comp173929_c0_seq1
103bp
PREDICTED:_TATA-binding_protein-associated_factor_172_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
9798 O_BomaMG24561_3prime_partial:A_BomaMG_comp173942_c0_seq1
386bp
PREDICTED:_NADPH-dependent_diflavin_oxidoreductase_1_[Amyelois_transitella]
GO:0003958 F NADPH-hemoprotein reductase activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008219 P cell death
GO:0010181 F FMN binding
GO:0016226 P iron-sulfur cluster assembly
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0036245 P cellular response to menadione
GO:0048471 C perinuclear region of cytoplasm
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
9799 O_BomaMG24562_3prime_partial:A_BomaMG_comp174000_c0_seq1
312bp
PREDICTED:_lachesin-like_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
9800 O_BomaMG24564_internal:A_BomaMG_comp174107_c0_seq1
150bp
PREDICTED:_uncharacterized_protein_LOC101740576_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016887 F ATP hydrolysis activity
GO:0032383 P regulation of intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0048545 P response to steroid hormone
GO:0055085 P transmembrane transport
9801 O_BomaMG24566_internal:A_BomaMG_comp174187_c0_seq1
187bp
hypothetical_protein_KGM_16836_[Danaus_plexippus]
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0051301 P cell division
9802 O_BomaMG24568_internal:A_BomaMG_comp174191_c0_seq1
229bp
PREDICTED:_intron-binding_protein_aquarius_isoform_X4_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
9803 O_BomaMG24570_internal:A_BomaMG_comp174315_c0_seq1
130bp
PREDICTED:_TATA-binding_protein-associated_factor_172_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
9804 O_BomaMG24572_internal:A_BomaMG_comp174321_c0_seq1
103bp
PREDICTED:_uncharacterized_protein_LOC101735688_[Bombyx_mori]
9805 O_BomaMG24573_3prime_partial:A_BomaMG_comp174324_c0_seq1
272bp
PREDICTED:_actin-binding_protein_IPP-like_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
9806 O_BomaMG24574_complete:A_BomaMG_comp174366_c0_seq1
131bp
PREDICTED:_uncharacterized_protein_LOC106104597_[Papilio_polytes]
9807 O_BomaMG24575_5prime_partial:A_BomaMG_comp174465_c0_seq1
208bp
PREDICTED:_A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1-like_isoform_X2_[Plutella_xylostella]
9808 O_BomaMG24576_internal:A_BomaMG_comp174599_c0_seq1
251bp
PREDICTED:_uncharacterized_protein_CG4449_[Amyelois_transitella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016925 P protein sumoylation
GO:0031386 F protein tag
GO:0034399 C nuclear periphery
9809 O_BomaMG24577_3prime_partial:A_BomaMG_comp174609_c0_seq1
318bp
Kelch_domain-containing_protein_4_[Papilio_machaon]
9810 O_BomaMG24578_5prime_partial:A_BomaMG_comp174611_c0_seq1
134bp
PREDICTED:_lachesin-like_[Bombyx_mori]
previous next from show/16228

- SilkBase 1999-2023 -