Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
9361	O_BomaMG2395_3prime_partial:A_BomaMG_comp13956_c0_seq1 102bp		PREDICTED:_GTP-binding_protein_Di-Ras2_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0005886 C plasma membrane GO:0007165 P signal transduction GO:0007264 P small GTPase mediated signal transduction GO:0008150 P biological_process GO:0015031 P protein transport GO:0016020 C membrane
9362	O_BomaMG23960_complete:A_BomaMG_comp119204_c0_seq1 824bp		PREDICTED:_NF-X1-type_zinc_finger_protein_NFXL1,_partial_[Bombyx_mori]	GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0046872 F metal ion binding
9363	O_BomaMG23963_internal:A_BomaMG_comp119255_c0_seq1 312bp		PREDICTED:_uncharacterized_protein_KIAA0195,_partial_[Bombyx_mori]	GO:0005654 C nucleoplasm GO:0016020 C membrane GO:0016021 C integral component of membrane
9364	O_BomaMG23965_3prime_partial:A_BomaMG_comp119279_c0_seq1 374bp		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]	GO:0000151 C ubiquitin ligase complex GO:0005737 C cytoplasm GO:0006368 P transcription elongation from RNA polymerase II promoter GO:0008023 C transcription elongation factor complex GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0030163 P protein catabolic process GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
9365	O_BomaMG23967_internal:A_BomaMG_comp119296_c0_seq1 117bp		PREDICTED:_steroid_hormone_receptor_ERR1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003707 F steroid hormone receptor activity GO:0005496 F steroid binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0043401 P steroid hormone mediated signaling pathway GO:0043565 F sequence-specific DNA binding GO:0046872 F metal ion binding
9366	O_BomaMG23969_internal:A_BomaMG_comp119398_c0_seq1 120bp		PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005886 C plasma membrane GO:0008201 F heparin binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016337 P cell-cell adhesion
9367	O_BomaMG2396_internal:A_BomaMG_comp13957_c0_seq1 236bp		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]	GO:0005509 F calcium ion binding GO:0005518 F collagen binding GO:0005882 C intermediate filament GO:0005886 C plasma membrane GO:0007155 P cell adhesion GO:0007160 P cell-matrix adhesion GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0019215 F intermediate filament binding GO:0030056 C hemidesmosome
9368	O_BomaMG23971_3prime_partial:A_BomaMG_comp119449_c0_seq1 506bp		PREDICTED:_RNA-binding_protein_28_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005730 C nucleolus GO:0006397 P mRNA processing GO:0008150 P biological_process GO:0008380 P RNA splicing GO:0044822 F RNA binding
9369	O_BomaMG23972_complete:A_BomaMG_comp119468_c0_seq1 167bp		PREDICTED:_uncharacterized_protein_LOC105392398_[Plutella_xylostella]
9370	O_BomaMG23973_internal:A_BomaMG_comp119484_c0_seq1 173bp		Uncharacterized_protein_C1orf131_[Papilio_xuthus]	GO:0044822 F RNA binding
9371	O_BomaMG23975_internal:A_BomaMG_comp119534_c0_seq1 103bp		PREDICTED:_LOW_QUALITY_PROTEIN:_double-stranded_RNA-binding_protein_Staufen_homolog_2-like_[Plutella_xylostella]	GO:0000932 C P-body GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003729 F mRNA binding GO:0003730 F mRNA 3'-UTR binding GO:0005737 C cytoplasm GO:0005875 C microtubule associated complex GO:0005938 C cell cortex GO:0006403 P RNA localization GO:0007017 P microtubule-based process GO:0007275 P multicellular organism development GO:0007315 P pole plasm assembly GO:0007316 P pole plasm RNA localization GO:0007317 P regulation of pole plasm oskar mRNA localization GO:0007318 P pole plasm protein localization GO:0007400 P neuroblast fate determination GO:0007616 P long-term memory GO:0008017 F microtubule binding GO:0008104 P protein localization GO:0008298 P intracellular mRNA localization GO:0008595 P anterior/posterior axis specification, embryo GO:0009925 C basal plasma membrane GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly GO:0016324 C apical plasma membrane GO:0019094 P pole plasm mRNA localization GO:0035418 P protein localization to synapse GO:0045167 P asymmetric protein localization involved in cell fate determination GO:0045177 C apical part of cell GO:0045179 C apical cortex GO:0045180 C basal cortex GO:0045450 P bicoid mRNA localization GO:0045451 P pole plasm oskar mRNA localization GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction GO:0046011 P regulation of oskar mRNA translation GO:0046012 P positive regulation of oskar mRNA translation GO:0048477 P oogenesis GO:0055059 P asymmetric neuroblast division GO:0060293 C germ plasm GO:0071212 C subsynaptic reticulum
9372	O_BomaMG23976_internal:A_BomaMG_comp119628_c0_seq1 280bp		PREDICTED:_zinc_finger_protein_271-like_[Bombyx_mori]
9373	O_BomaMG23977_3prime_partial:A_BomaMG_comp119644_c0_seq1 342bp		PREDICTED:_WW_domain-binding_protein_11_[Bombyx_mori]	GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0006364 P rRNA processing GO:0006396 P RNA processing GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0008599 F protein phosphatase regulator activity GO:0016607 C nuclear speck GO:0043231 C intracellular membrane-bounded organelle GO:0044822 F RNA binding GO:0045292 P mRNA cis splicing, via spliceosome GO:0050699 F WW domain binding GO:0050790 P regulation of catalytic activity GO:1903146 P regulation of autophagy of mitochondrion GO:1903955 P positive regulation of protein targeting to mitochondrion
9374	O_BomaMG23979_internal:A_BomaMG_comp119683_c0_seq1 108bp		PREDICTED:_exportin-5-like_[Plutella_xylostella]	GO:0000049 F tRNA binding GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006611 P protein export from nucleus GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0008536 F small GTPase binding GO:0008565 F obsolete protein transporter activity GO:0015031 P protein transport GO:0031047 P gene silencing by RNA GO:0035281 P pre-miRNA export from nucleus GO:0042565 C RNA nuclear export complex GO:0044822 F RNA binding GO:0070883 F pre-miRNA binding GO:0090631 F nucleocytoplasmic carrier activity GO:1900370 P positive regulation of RNA interference
9375	O_BomaMG23980_internal:A_BomaMG_comp119807_c0_seq1 116bp		PREDICTED:_adenomatous_polyposis_coli_protein-like_isoform_X2_[Bombyx_mori]
9376	O_BomaMG23982_5prime_partial:A_BomaMG_comp120001_c0_seq1 122bp		PREDICTED:_uncharacterized_protein_LOC106709836_[Papilio_machaon]
9377	O_BomaMG23983_internal:A_BomaMG_comp120074_c0_seq1 139bp		PREDICTED:_prominin-like_protein_[Bombyx_mori]
9378	O_BomaMG23985_internal:A_BomaMG_comp120130_c0_seq1 103bp		PREDICTED:_nodal_modulator_1_[Bombyx_mori]
9379	O_BomaMG23986_5prime_partial:A_BomaMG_comp120304_c0_seq1 243bp		Uncharacterized_protein_OBRU01_24682_[Operophtera_brumata]
9380	O_BomaMG23987_5prime_partial:A_BomaMG_comp120526_c0_seq1 115bp		PREDICTED:_uncharacterized_protein_C18orf8_[Bombyx_mori]	GO:0005765 C lysosomal membrane
9381	O_BomaMG23988_internal:A_BomaMG_comp120850_c0_seq1 166bp		PREDICTED:_uncharacterized_protein_LOC101740483_[Bombyx_mori]
9382	O_BomaMG2398_internal:A_BomaMG_comp13959_c0_seq1 190bp		endonuclease-reverse_transcriptase_[Bombyx_mori]
9383	O_BomaMG23990_complete:A_BomaMG_comp120965_c0_seq1 337bp		PREDICTED:_peptidylglycine_alpha-hydroxylating_monooxygenase_isoform_X1_[Amyelois_transitella]	GO:0001519 P peptide amidation GO:0003824 F catalytic activity GO:0004497 F monooxygenase activity GO:0004504 F peptidylglycine monooxygenase activity GO:0005507 F copper ion binding GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0006518 P peptide metabolic process GO:0007613 P memory GO:0009620 P response to fungus GO:0016020 C membrane GO:0016491 F oxidoreductase activity GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen GO:0032504 P multicellular organism reproduction GO:0044719 P regulation of imaginal disc-derived wing size GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
9384	O_BomaMG23992_internal:A_BomaMG_comp121126_c0_seq1 114bp		PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]
9385	O_BomaMG23993_5prime_partial:A_BomaMG_comp121279_c0_seq1 127bp		PREDICTED:_uncharacterized_protein_LOC105842388_[Bombyx_mori]
9386	O_BomaMG23994_3prime_partial:A_BomaMG_comp121303_c0_seq1 249bp		PREDICTED:_macrophage_erythroblast_attacher_isoform_X2_[Bombyx_mori]	GO:0003779 F actin binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0007049 P cell cycle GO:0016020 C membrane GO:0016363 C nuclear matrix GO:0043249 P erythrocyte maturation GO:0051301 P cell division
9387	O_BomaMG2399_internal:A_BomaMG_comp13966_c0_seq1 146bp		PREDICTED:_zonadhesin_isoform_X1_[Amyelois_transitella]
9388	O_BomaMG239_internal:A_BomaMG_comp2513_c0_seq1 137bp
9389	O_BomaMG23_internal:A_BomaMG_comp775_c0_seq1 191bp
9390	O_BomaMG24000_complete:A_BomaMG_comp121386_c0_seq1 486bp		PREDICTED:_monosaccharide-sensing_protein_3-like_[Plutella_xylostella]	GO:0005215 F transporter activity GO:0005886 C plasma membrane GO:0006810 P transport GO:0008643 P carbohydrate transport GO:0015574 F trehalose transmembrane transporter activity GO:0015767 P lactose transport GO:0015768 P maltose transport GO:0015770 P sucrose transport GO:0015771 P trehalose transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport