Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
9271	O_BomaMG23816_internal:A_BomaMG_comp112186_c0_seq1 219bp		PREDICTED:_zinc_finger_MYM-type_protein_4_[Bombyx_mori]	GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006357 P regulation of transcription by RNA polymerase II GO:0007010 P cytoskeleton organization GO:0007275 P multicellular organism development GO:0008270 F zinc ion binding GO:0022604 P regulation of cell morphogenesis GO:0046872 F metal ion binding
9272	O_BomaMG23818_internal:A_BomaMG_comp112249_c0_seq1 164bp		dnaJ_homolog_subfamily_C_member_16_precursor_[Bombyx_mori]	GO:0005623 C obsolete cell GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0045454 P cell redox homeostasis
9273	O_BomaMG2381_internal:A_BomaMG_comp13921_c1_seq1 131bp		PREDICTED:_intracellular_protein_transport_protein_USO1-like_[Bombyx_mori]
9274	O_BomaMG23821_3prime_partial:A_BomaMG_comp112452_c0_seq1 475bp		PREDICTED:_zinc_finger_matrin-type_protein_CG9776_isoform_X1_[Bombyx_mori]	GO:0005634 C nucleus GO:0046872 F metal ion binding
9275	O_BomaMG23822_3prime_partial:A_BomaMG_comp112854_c0_seq1 173bp		minichromosome_maintenance_complex_component_7_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0003682 F chromatin binding GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005656 C nuclear pre-replicative complex GO:0005875 C microtubule associated complex GO:0006260 P DNA replication GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication GO:0006270 P DNA replication initiation GO:0007049 P cell cycle GO:0007095 P mitotic G2 DNA damage checkpoint signaling GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding GO:0042555 C MCM complex GO:0043138 F 3'-5' DNA helicase activity
9276	O_BomaMG23823_complete:A_BomaMG_comp112925_c0_seq1 541bp		PREDICTED:_probable_ATP-dependent_RNA_helicase_Dbp45A_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0010501 P RNA secondary structure unwinding GO:0016787 F hydrolase activity
9277	O_BomaMG23825_3prime_partial:A_BomaMG_comp113034_c0_seq1 244bp		PREDICTED:_forkhead_box_protein_J2-like_[Amyelois_transitella]	GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0043565 F sequence-specific DNA binding
9278	O_BomaMG23827_complete:A_BomaMG_comp113078_c0_seq1 617bp		PREDICTED:_F-box_only_protein_42_[Amyelois_transitella]
9279	O_BomaMG23829_3prime_partial:A_BomaMG_comp113083_c0_seq1 165bp		PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
9280	O_BomaMG23830_3prime_partial:A_BomaMG_comp113087_c0_seq1 372bp		hypothetical_protein_KGM_07136_[Danaus_plexippus]
9281	O_BomaMG23831_5prime_partial:A_BomaMG_comp113108_c0_seq1 109bp		nucleostemin_3_[Papilio_xuthus]	GO:0000166 F nucleotide binding GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005829 C cytosol GO:0006810 P transport GO:0008152 P metabolic process GO:0015030 C Cajal body GO:0015031 P protein transport GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0042254 P ribosome biogenesis GO:0051168 P nuclear export
9282	O_BomaMG23832_3prime_partial:A_BomaMG_comp113138_c0_seq1 249bp		PREDICTED:_single-stranded_DNA-binding_protein_3_isoform_X1_[Bombyx_mori]	GO:0002244 P hematopoietic progenitor cell differentiation GO:0003677 F DNA binding GO:0003697 F single-stranded DNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006461 P protein-containing complex assembly GO:0008284 P positive regulation of cell population proliferation GO:0021501 P prechordal plate formation GO:0021547 P midbrain-hindbrain boundary initiation GO:0043234 C protein-containing complex GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0060322 P head development GO:0060323 P head morphogenesis GO:2000744 P positive regulation of anterior head development
9283	O_BomaMG23833_internal:A_BomaMG_comp113149_c0_seq1 142bp		PREDICTED:_dnaJ_homolog_subfamily_C_member_13_isoform_X1_[Bombyx_mori]	GO:0001649 P osteoblast differentiation GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005765 C lysosomal membrane GO:0005768 C endosome GO:0005769 C early endosome GO:0006810 P transport GO:0007032 P endosome organization GO:0010008 C endosome membrane GO:0015031 P protein transport GO:0016020 C membrane GO:0031901 C early endosome membrane GO:0043231 C intracellular membrane-bounded organelle GO:0070062 C extracellular exosome GO:0071203 C WASH complex GO:1902954 P regulation of early endosome to recycling endosome transport GO:2000641 P regulation of early endosome to late endosome transport
9284	O_BomaMG23835_3prime_partial:A_BomaMG_comp113210_c0_seq1 279bp		PREDICTED:_protein_cramped_[Amyelois_transitella]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007275 P multicellular organism development GO:0007379 P segment specification
9285	O_BomaMG23837_internal:A_BomaMG_comp113234_c0_seq1 406bp		PREDICTED:_ran_GTPase-activating_protein_1_[Papilio_xuthus]	GO:0000775 C chromosome, centromeric region GO:0000776 C kinetochore GO:0000777 C kinetochore GO:0000922 C spindle pole GO:0005096 F GTPase activator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005635 C nuclear envelope GO:0005643 C nuclear pore GO:0005694 C chromosome GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0007062 P sister chromatid cohesion GO:0007165 P signal transduction GO:0008536 F small GTPase binding GO:0016020 C membrane GO:0016925 P protein sumoylation GO:0030425 C dendrite GO:0031625 F ubiquitin protein ligase binding GO:0031965 C nuclear membrane GO:0043231 C intracellular membrane-bounded organelle GO:0043547 P positive regulation of GTPase activity GO:0044614 C nuclear pore cytoplasmic filaments GO:0046826 P negative regulation of protein export from nucleus GO:0048471 C perinuclear region of cytoplasm GO:0048678 P response to axon injury GO:0071375 P cellular response to peptide hormone stimulus GO:0072686 C mitotic spindle GO:1904115 C axon cytoplasm GO:1904117 P cellular response to vasopressin GO:1990723 C cytoplasmic periphery of the nuclear pore complex
9286	O_BomaMG2383_internal:A_BomaMG_comp13925_c0_seq1 300bp		PREDICTED:_uncharacterized_protein_LOC101743538_[Bombyx_mori]
9287	O_BomaMG23840_internal:A_BomaMG_comp113265_c0_seq1 118bp		PREDICTED:_kinesin-like_protein_KIF21A_isoform_X5_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003777 F microtubule motor activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005871 C kinesin complex GO:0005874 C microtubule GO:0007018 P microtubule-based movement GO:0008017 F microtubule binding GO:0008152 P metabolic process GO:0016887 F ATP hydrolysis activity
9288	O_BomaMG23842_internal:A_BomaMG_comp113314_c0_seq1 245bp		PREDICTED:_epsin-2,_partial_[Papilio_xuthus]	GO:0005515 F protein binding GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006897 P endocytosis GO:0008289 F lipid binding GO:0030100 P regulation of endocytosis GO:0030128 C clathrin coat of endocytic vesicle GO:0030136 C clathrin-coated vesicle GO:0031410 C cytoplasmic vesicle GO:0043231 C intracellular membrane-bounded organelle
9289	O_BomaMG23845_internal:A_BomaMG_comp113336_c0_seq1 239bp		PREDICTED:_protein_split_ends_isoform_X4_[Amyelois_transitella]
9290	O_BomaMG23846_internal:A_BomaMG_comp113351_c0_seq1 175bp		PREDICTED:_cytoskeleton-associated_protein_5-like_[Bombyx_mori]	GO:0000922 C spindle pole GO:0000930 C gamma-tubulin complex GO:0005737 C cytoplasm GO:0005813 C centrosome GO:0005815 C microtubule organizing center GO:0005856 C cytoskeleton GO:0007049 P cell cycle GO:0007051 P spindle organization GO:0007067 P mitotic cell cycle GO:0008017 F microtubule binding GO:0015630 C microtubule cytoskeleton GO:0016020 C membrane GO:0030951 P establishment or maintenance of microtubule cytoskeleton polarity GO:0035371 C microtubule plus-end GO:0043021 F ribonucleoprotein complex binding GO:0043234 C protein-containing complex GO:0050658 P RNA transport GO:0051297 P centrosome cycle GO:0051301 P cell division
9291	O_BomaMG23847_complete:A_BomaMG_comp113420_c0_seq1 132bp		allatotropin_[Manduca_sexta]	GO:0005576 C extracellular region GO:0007218 P neuropeptide signaling pathway
9292	O_BomaMG23848_internal:A_BomaMG_comp113422_c0_seq1 108bp		PREDICTED:_myotubularin-related_protein_3_[Bombyx_mori]	GO:0004438 F phosphatidylinositol-3-phosphatase activity GO:0004721 F phosphoprotein phosphatase activity GO:0004725 F protein tyrosine phosphatase activity GO:0005737 C cytoplasm GO:0006470 P protein dephosphorylation GO:0006629 P lipid metabolic process GO:0016020 C membrane GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0019898 C extrinsic component of membrane GO:0035335 P peptidyl-tyrosine dephosphorylation GO:0046856 P phosphatidylinositol dephosphorylation GO:0046872 F metal ion binding GO:0052629 F phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
9293	O_BomaMG2384_internal:A_BomaMG_comp13925_c1_seq1 119bp		PREDICTED:_uncharacterized_protein_LOC101743538_[Bombyx_mori]
9294	O_BomaMG23851_complete:A_BomaMG_comp113442_c0_seq1 234bp		PREDICTED:_uncharacterized_protein_LOC101737115_[Bombyx_mori]
9295	O_BomaMG23852_3prime_partial:A_BomaMG_comp113449_c0_seq1 241bp		PREDICTED:_zinc_finger_protein_OZF_isoform_X2_[Bombyx_mori]
9296	O_BomaMG23853_3prime_partial:A_BomaMG_comp113467_c0_seq1 186bp		putative_malonyl-CoA-acyl_carrier_protein_transacylase,_mitochondrial_[Papilio_machaon]	GO:0003824 F catalytic activity GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity GO:0005739 C mitochondrion GO:0006629 P lipid metabolic process GO:0006631 P fatty acid metabolic process GO:0006633 P fatty acid biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity
9297	O_BomaMG23854_complete:A_BomaMG_comp113548_c0_seq1 254bp		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX46_[Papilio_machaon]
9298	O_BomaMG23856_5prime_partial:A_BomaMG_comp113578_c0_seq1 117bp		PREDICTED:_endophilin-A_isoform_X2_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006897 P endocytosis GO:0016020 C membrane GO:0042171 F lysophosphatidic acid acyltransferase activity GO:0048488 P synaptic vesicle endocytosis GO:0050803 P regulation of synapse structure or activity
9299	O_BomaMG23857_3prime_partial:A_BomaMG_comp113727_c0_seq1 403bp		PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]	GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005096 F GTPase activator activity GO:0005768 C endosome GO:0005829 C cytosol GO:0006897 P endocytosis GO:0007165 P signal transduction GO:0016020 C membrane GO:0032794 F GTPase activating protein binding GO:0043087 P regulation of GTPase activity GO:0043547 P positive regulation of GTPase activity GO:0051223 P regulation of protein transport
9300	O_BomaMG23859_internal:A_BomaMG_comp113736_c0_seq1 215bp		PREDICTED:_uncharacterized_protein_LOC101744850_isoform_X2_[Bombyx_mori]