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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9091 O_BomaMG23544_5prime_partial:A_BomaMG_comp97461_c0_seq1
104bp
9092 O_BomaMG23546_3prime_partial:A_BomaMG_comp97476_c0_seq1
236bp
GO:0005737 C cytoplasm
9093 O_BomaMG23547_complete:A_BomaMG_comp97641_c0_seq1
339bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9094 O_BomaMG23548_internal:A_BomaMG_comp97661_c0_seq1
318bp
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
9095 O_BomaMG2354_3prime_partial:A_BomaMG_comp13833_c0_seq1
492bp
Cycle_like_factor_b_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000976 F transcription cis-regulatory region binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001190 F obsolete transcriptional activator activity, RNA polymerase II transcription factor binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007623 P circadian rhythm
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0017162 F aryl hydrocarbon receptor binding
GO:0032007 P negative regulation of TOR signaling
GO:0032922 P circadian regulation of gene expression
GO:0033391 C chromatoid body
GO:0042176 P regulation of protein catabolic process
GO:0042634 P regulation of hair cycle
GO:0042753 P positive regulation of circadian rhythm
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045599 P negative regulation of fat cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0050767 P regulation of neurogenesis
GO:0050796 P regulation of insulin secretion
GO:0051726 P regulation of cell cycle
GO:0051775 P response to redox state
GO:0051879 F Hsp90 protein binding
GO:0060137 P maternal process involved in parturition
GO:0070491 F DNA-binding transcription factor binding
GO:0070888 F E-box binding
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0090403 P oxidative stress-induced premature senescence
GO:2000074 P regulation of type B pancreatic cell development
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
GO:2000772 P regulation of cellular senescence
GO:2001016 P positive regulation of skeletal muscle cell differentiation
9096 O_BomaMG23550_complete:A_BomaMG_comp97723_c0_seq1
492bp
GO:0003824 F catalytic activity
GO:0004058 F aromatic-L-amino-acid decarboxylase activity
GO:0006520 P cellular amino acid metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
GO:0042416 P dopamine biosynthetic process
GO:0042423 P catecholamine biosynthetic process
9097 O_BomaMG23551_5prime_partial:A_BomaMG_comp97730_c0_seq1
540bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
9098 O_BomaMG23552_internal:A_BomaMG_comp97751_c0_seq1
119bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007029 P endoplasmic reticulum organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0021762 P substantia nigra development
GO:0048208 P COPII vesicle coating
9099 O_BomaMG23553_3prime_partial:A_BomaMG_comp97756_c0_seq1
225bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
9100 O_BomaMG23554_complete:A_BomaMG_comp97917_c0_seq1
213bp
9101 O_BomaMG23555_5prime_partial:A_BomaMG_comp97999_c0_seq1
114bp
9102 O_BomaMG23556_5prime_partial:A_BomaMG_comp98023_c0_seq1
240bp
9103 O_BomaMG23558_complete:A_BomaMG_comp98163_c0_seq1
445bp
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000780 C condensed chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016358 P dendrite development
GO:0016568 P chromatin organization
GO:0016604 C nuclear body
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050773 P regulation of dendrite development
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0071565 C nBAF complex
9104 O_BomaMG2355_internal:A_BomaMG_comp13835_c0_seq1
137bp
PREDICTED:_DNA-binding_protein_D-ETS-3_isoform_X2_[Amyelois_transitella]
9105 O_BomaMG23561_3prime_partial:A_BomaMG_comp98180_c0_seq1
424bp
GO:0004175 F endopeptidase activity
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010634 P positive regulation of epithelial cell migration
GO:0016787 F hydrolase activity
GO:0070062 C extracellular exosome
GO:0090541 F MIT domain binding
GO:0097264 P self proteolysis
9106 O_BomaMG23562_internal:A_BomaMG_comp98207_c0_seq1
287bp
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0009395 P phospholipid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030027 C lamellipodium
GO:0030334 P regulation of cell migration
GO:0030335 P positive regulation of cell migration
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0031985 C Golgi cisterna
GO:0032534 P regulation of microvillus assembly
GO:0035091 F phosphatidylinositol binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043434 P response to peptide hormone
GO:0048017 P inositol lipid-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
9107 O_BomaMG23564_complete:A_BomaMG_comp98246_c0_seq1
306bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0000974 C Prp19 complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006457 P protein folding
GO:0006909 P phagocytosis
GO:0016853 F isomerase activity
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
9108 O_BomaMG23565_complete:A_BomaMG_comp98251_c0_seq1
411bp
GO:0004622 F lysophospholipase activity
GO:0005543 F phospholipid binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006650 P glycerophospholipid metabolic process
GO:0006672 P ceramide metabolic process
GO:0008374 F O-acyltransferase activity
GO:0009062 P fatty acid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0034638 P phosphatidylcholine catabolic process
GO:0046338 P phosphatidylethanolamine catabolic process
GO:0046470 P phosphatidylcholine metabolic process
GO:0047499 F calcium-independent phospholipase A2 activity
GO:0070062 C extracellular exosome
9109 O_BomaMG23567_5prime_partial:A_BomaMG_comp98576_c0_seq1
234bp
9110 O_BomaMG23568_complete:A_BomaMG_comp98746_c0_seq1
460bp
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
9111 O_BomaMG2356_3prime_partial:A_BomaMG_comp13836_c0_seq1
327bp
presenilin_isoform_B_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002027 P regulation of heart rate
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0005938 C cell cortex
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006816 P calcium ion transport
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008233 F peptidase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030018 C Z disc
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
9112 O_BomaMG23570_5prime_partial:A_BomaMG_comp99505_c0_seq1
341bp
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
9113 O_BomaMG23572_complete:A_BomaMG_comp99589_c0_seq1
220bp
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
9114 O_BomaMG23573_internal:A_BomaMG_comp99660_c0_seq1
284bp
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0008150 P biological_process
GO:0016575 P histone deacetylation
GO:0034773 P histone H4-K20 trimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0097368 P establishment of Sertoli cell barrier
9115 O_BomaMG23575_internal:A_BomaMG_comp99679_c0_seq1
230bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0032433 C filopodium tip
GO:0042995 C cell projection
GO:0097038 C perinuclear endoplasmic reticulum
9116 O_BomaMG23579_complete:A_BomaMG_comp99684_c0_seq1
117bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031953 P negative regulation of protein autophosphorylation
GO:0034198 P cellular response to amino acid starvation
GO:0042149 P cellular response to glucose starvation
GO:0045666 P positive regulation of neuron differentiation
GO:0060548 P negative regulation of cell death
GO:0060733 P GCN2-mediated signaling
GO:0070301 P cellular response to hydrogen peroxide
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:0071468 P cellular response to acidic pH
GO:0071494 P cellular response to UV-C
GO:0072755 P cellular response to benomyl
GO:0097201 P negative regulation of transcription from RNA polymerase II promoter in response to stress
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
9117 O_BomaMG2357_3prime_partial:A_BomaMG_comp13847_c0_seq1
189bp
PREDICTED:_uncharacterized_protein_LOC101737914_isoform_X2_[Bombyx_mori]
9118 O_BomaMG23580_3prime_partial:A_BomaMG_comp99696_c0_seq1
218bp
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006897 P endocytosis
GO:0008017 F microtubule binding
GO:0030705 P cytoskeleton-dependent intracellular transport
9119 O_BomaMG23581_3prime_partial:A_BomaMG_comp99732_c0_seq1
426bp
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016874 F ligase activity
9120 O_BomaMG23583_3prime_partial:A_BomaMG_comp99751_c0_seq1
428bp
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007126 P meiotic cell cycle
GO:0008275 C gamma-tubulin small complex
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
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