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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8971 O_BomaMG23381_5prime_partial:A_BomaMG_comp87772_c0_seq1
249bp
8972 O_BomaMG23382_complete:A_BomaMG_comp87799_c0_seq1
199bp
8973 O_BomaMG23383_complete:A_BomaMG_comp87855_c0_seq1
508bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
8974 O_BomaMG23386_internal:A_BomaMG_comp88310_c0_seq1
223bp
GO:0001726 C ruffle
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0006936 P muscle contraction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
8975 O_BomaMG23387_internal:A_BomaMG_comp88387_c0_seq1
379bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
GO:0042795 P snRNA transcription by RNA polymerase II
8976 O_BomaMG23389_complete:A_BomaMG_comp88399_c0_seq1
387bp
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
8977 O_BomaMG2338_internal:A_BomaMG_comp13778_c0_seq1
150bp
PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Plutella_xylostella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006886 P intracellular protein transport
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
8978 O_BomaMG23390_complete:A_BomaMG_comp88661_c0_seq1
326bp
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070985 C transcription factor TFIIK complex
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
8979 O_BomaMG23391_3prime_partial:A_BomaMG_comp88997_c0_seq1
137bp
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007614 P short-term memory
GO:0007616 P long-term memory
GO:0009994 P oocyte differentiation
GO:0010494 C cytoplasmic stress granule
GO:0010603 P regulation of cytoplasmic mRNA processing body assembly
GO:0022008 P neurogenesis
GO:0022416 P chaeta development
GO:0030833 P regulation of actin filament polymerization
GO:0032092 P positive regulation of protein binding
GO:0034063 P stress granule assembly
GO:0042051 P compound eye photoreceptor development
GO:0044822 F RNA binding
GO:0045475 P locomotor rhythm
GO:0046959 P habituation
GO:0048749 P compound eye development
GO:0051823 P regulation of synapse structural plasticity
GO:0060965 P negative regulation of gene silencing by miRNA
GO:0090328 P regulation of olfactory learning
GO:0097167 P circadian regulation of translation
GO:1901216 P positive regulation of neuron death
8980 O_BomaMG23394_internal:A_BomaMG_comp89069_c0_seq1
123bp
GO:0003824 F catalytic activity
GO:0004134 F 4-alpha-glucanotransferase activity
GO:0004135 F amylo-alpha-1,6-glucosidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0005980 P glycogen catabolic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
8981 O_BomaMG23395_internal:A_BomaMG_comp89547_c0_seq1
276bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
8982 O_BomaMG23397_3prime_partial:A_BomaMG_comp89628_c0_seq1
223bp
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0032006 P regulation of TOR signaling
GO:0045087 P innate immune response
GO:0045444 P fat cell differentiation
8983 O_BomaMG233_internal:A_BomaMG_comp2386_c1_seq1
118bp
GO:0007155 P cell adhesion
GO:0030246 F carbohydrate binding
8984 O_BomaMG23400_3prime_partial:A_BomaMG_comp89677_c0_seq1
307bp
8985 O_BomaMG23401_3prime_partial:A_BomaMG_comp89776_c0_seq1
416bp
GO:0000056 P ribosomal small subunit export from nucleus
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0016049 P cell growth
GO:0022627 C cytosolic small ribosomal subunit
GO:0042023 P DNA endoreduplication
GO:0042274 P ribosomal small subunit biogenesis
GO:0045793 P positive regulation of cell size
8986 O_BomaMG23403_complete:A_BomaMG_comp89797_c0_seq1
328bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
8987 O_BomaMG23404_5prime_partial:A_BomaMG_comp89800_c0_seq1
428bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0043550 P regulation of lipid kinase activity
GO:0051726 P regulation of cell cycle
GO:1990841 F promoter-specific chromatin binding
8988 O_BomaMG23405_complete:A_BomaMG_comp89876_c0_seq1
224bp
GO:0000042 P protein localization to Golgi apparatus
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005796 C Golgi lumen
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006913 P nucleocytoplasmic transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0048705 P skeletal system morphogenesis
GO:0070062 C extracellular exosome
GO:1903358 P regulation of Golgi organization
GO:1903434 P negative regulation of constitutive secretory pathway
GO:2000156 P regulation of retrograde vesicle-mediated transport, Golgi to ER
GO:2000785 P regulation of autophagosome assembly
8989 O_BomaMG23406_complete:A_BomaMG_comp89903_c0_seq1
650bp
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007032 P endosome organization
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030348 F syntaxin-3 binding
GO:0030897 C HOPS complex
GO:0031091 C platelet alpha granule
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032400 P melanosome localization
GO:0032418 P lysosome localization
GO:0035855 P megakaryocyte development
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0061025 P membrane fusion
GO:0070889 P platelet alpha granule organization
GO:0071439 C clathrin complex
GO:0090330 P regulation of platelet aggregation
8990 O_BomaMG23407_3prime_partial:A_BomaMG_comp89977_c0_seq1
333bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008340 P determination of adult lifespan
GO:0008361 P regulation of cell size
GO:0009792 P embryo development ending in birth or egg hatching
GO:0012501 P programmed cell death
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030516 P regulation of axon extension
GO:0032880 P regulation of protein localization
GO:0040014 P regulation of multicellular organism growth
GO:0040024 P dauer larval development
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043277 P apoptotic cell clearance
GO:0045138 P nematode male tail tip morphogenesis
GO:0046777 P protein autophosphorylation
8991 O_BomaMG23408_internal:A_BomaMG_comp90019_c0_seq1
249bp
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
8992 O_BomaMG23409_complete:A_BomaMG_comp90022_c0_seq1
566bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8993 O_BomaMG2340_internal:A_BomaMG_comp13781_c0_seq1
118bp
PREDICTED:_IQ_motif_and_SEC7_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0030036 P actin cytoskeleton organization
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
8994 O_BomaMG23411_5prime_partial:A_BomaMG_comp90041_c0_seq1
105bp
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0055114 P obsolete oxidation-reduction process
8995 O_BomaMG23412_internal:A_BomaMG_comp90463_c0_seq1
366bp
GO:0000139 C Golgi membrane
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0051645 P Golgi localization
GO:0051683 P establishment of Golgi localization
GO:0051684 P maintenance of Golgi location
GO:0072384 P organelle transport along microtubule
8996 O_BomaMG23417_5prime_partial:A_BomaMG_comp90494_c0_seq1
108bp
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0030496 C midbody
GO:0035167 P larval lymph gland hemopoiesis
GO:0046872 F metal ion binding
8997 O_BomaMG23418_5prime_partial:A_BomaMG_comp90526_c0_seq1
226bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
8998 O_BomaMG23419_complete:A_BomaMG_comp90535_c0_seq1
497bp
GO:0004185 F serine-type carboxypeptidase activity
GO:0005575 C cellular_component
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0045087 P innate immune response
8999 O_BomaMG2341_internal:A_BomaMG_comp13788_c0_seq1
206bp
PREDICTED:_ataxin-7-like_protein_1_[Amyelois_transitella]
9000 O_BomaMG23421_3prime_partial:A_BomaMG_comp90633_c0_seq1
121bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0009966 P regulation of signal transduction
GO:0010765 P positive regulation of sodium ion transport
GO:0016020 C membrane
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
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