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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8071 O_BomaMG2218_internal:A_BomaMG_comp13399_c0_seq1
199bp
PREDICTED:_ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
8072 O_BomaMG22190_5prime_partial:A_BomaMG_comp26094_c0_seq1
171bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
8073 O_BomaMG22191_5prime_partial:A_BomaMG_comp26103_c0_seq1
202bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
8074 O_BomaMG22192_complete:A_BomaMG_comp26107_c0_seq1
131bp
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006091 P generation of precursor metabolites and energy
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
8075 O_BomaMG22193_5prime_partial:A_BomaMG_comp26111_c0_seq1
159bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
8076 O_BomaMG22194_complete:A_BomaMG_comp26112_c0_seq1
108bp
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0031966 C mitochondrial membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046331 P lateral inhibition
8077 O_BomaMG22196_complete:A_BomaMG_comp26113_c0_seq1
646bp
GO:0003333 P amino acid transmembrane transport
GO:0005283 F amino acid:sodium symporter activity
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006836 P neurotransmitter transport
GO:0006865 P amino acid transport
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042940 P D-amino acid transport
GO:0042943 F D-amino acid transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1903825 P organic acid transmembrane transport
8078 O_BomaMG22197_complete:A_BomaMG_comp26118_c0_seq1
613bp
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0006413 P translational initiation
GO:0008022 F protein C-terminus binding
GO:0008143 F poly(A) binding
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0008494 F translation activator activity
GO:0010494 C cytoplasmic stress granule
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0045727 P positive regulation of translation
GO:0048255 P mRNA stabilization
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8079 O_BomaMG22198_complete:A_BomaMG_comp26125_c0_seq1
434bp
GO:0000015 C phosphopyruvate hydratase complex
GO:0000287 F magnesium ion binding
GO:0004634 F phosphopyruvate hydratase activity
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0006096 P glycolytic process
GO:0010906 P regulation of glucose metabolic process
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
8080 O_BomaMG221_internal:A_BomaMG_comp2290_c0_seq1
100bp
PREDICTED:_cytosolic_carboxypeptidase_2-like_[Bombyx_mori]
GO:0002164 P larval development
GO:0003407 P neural retina development
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
8081 O_BomaMG22200_complete:A_BomaMG_comp26135_c0_seq1
349bp
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0033179 C proton-transporting V-type ATPase, V0 domain
8082 O_BomaMG22202_complete:A_BomaMG_comp26136_c0_seq1
178bp
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
8083 O_BomaMG22203_complete:A_BomaMG_comp26142_c0_seq1
384bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006538 P glutamate catabolic process
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0007416 P synapse assembly
GO:0016874 F ligase activity
GO:0045213 P neurotransmitter receptor metabolic process
8084 O_BomaMG22204_complete:A_BomaMG_comp26153_c0_seq1
166bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006457 P protein folding
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0016853 F isomerase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0042277 F peptide binding
GO:0045859 P regulation of protein kinase activity
GO:0048102 P autophagic cell death
8085 O_BomaMG22206_complete:A_BomaMG_comp26173_c0_seq1
100bp
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
8086 O_BomaMG22207_complete:A_BomaMG_comp26182_c0_seq1
133bp
GO:0000166 F nucleotide binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
8087 O_BomaMG22208_complete:A_BomaMG_comp26183_c0_seq1
616bp
GO:0000023 P maltose metabolic process
GO:0003824 F catalytic activity
GO:0004558 F alpha-1,4-glucosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032450 F maltose alpha-glucosidase activity
GO:0043169 F cation binding
8088 O_BomaMG22209_complete:A_BomaMG_comp26186_c0_seq1
365bp
GO:0003824 F catalytic activity
GO:0004332 F fructose-bisphosphate aldolase activity
GO:0005829 C cytosol
GO:0006096 P glycolytic process
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007498 P mesoderm development
GO:0016829 F lyase activity
GO:0030018 C Z disc
GO:0031430 C M band
8089 O_BomaMG2220_internal:A_BomaMG_comp13399_c0_seq2
217bp
PREDICTED:_ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
8090 O_BomaMG22210_5prime_partial:A_BomaMG_comp26199_c0_seq1
201bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
8091 O_BomaMG22211_complete:A_BomaMG_comp26202_c0_seq1
195bp
GO:0000022 P mitotic spindle elongation
GO:0000228 C nuclear chromosome
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007052 P mitotic spindle organization
GO:0015935 C small ribosomal subunit
GO:0019843 F rRNA binding
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0045903 P positive regulation of translational fidelity
8092 O_BomaMG22212_complete:A_BomaMG_comp26206_c0_seq1
546bp
GO:0003824 F catalytic activity
GO:0004771 F sterol esterase activity
GO:0004806 F triglyceride lipase activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0006707 P cholesterol catabolic process
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0008201 F heparin binding
GO:0009062 P fatty acid catabolic process
GO:0009986 C cell surface
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0018350 P protein esterification
GO:0030157 P pancreatic juice secretion
GO:0030299 P intestinal cholesterol absorption
GO:0042043 F neurexin family protein binding
GO:0044241 P lipid digestion
GO:0044258 P intestinal lipid catabolic process
GO:0045202 C synapse
GO:0047372 F acylglycerol lipase activity
GO:0050804 P modulation of chemical synaptic transmission
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
8093 O_BomaMG22213_complete:A_BomaMG_comp26206_c0_seq1
129bp
8094 O_BomaMG22214_complete:A_BomaMG_comp26208_c0_seq1
206bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
8095 O_BomaMG22215_complete:A_BomaMG_comp26212_c0_seq1
495bp
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0033961 F cis-stilbene-oxide hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
8096 O_BomaMG22216_complete:A_BomaMG_comp26217_c0_seq1
140bp
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
8097 O_BomaMG22217_complete:A_BomaMG_comp26224_c0_seq1
289bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
8098 O_BomaMG22218_complete:A_BomaMG_comp26224_c0_seq1
153bp
8099 O_BomaMG22219_complete:A_BomaMG_comp26224_c0_seq1
141bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
8100 O_BomaMG22222_complete:A_BomaMG_comp26225_c0_seq1
100bp
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