Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
6601	O_BomaMG20025_complete:A_BomaMG_comp25731_c0_seq5 623bp			GO:0003824 F catalytic activity GO:0004802 F transketolase activity GO:0005737 C cytoplasm GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0046872 F metal ion binding
6602	O_BomaMG2002_3prime_partial:A_BomaMG_comp13103_c0_seq1 363bp		PREDICTED:_uncharacterized_protein_LOC101737485_isoform_X2_[Bombyx_mori]
6603	O_BomaMG20030_complete:A_BomaMG_comp25731_c0_seq9 623bp			GO:0003824 F catalytic activity GO:0004802 F transketolase activity GO:0005737 C cytoplasm GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0046872 F metal ion binding
6604	O_BomaMG20035_complete:A_BomaMG_comp25731_c0_seq13 623bp			GO:0003824 F catalytic activity GO:0004802 F transketolase activity GO:0005737 C cytoplasm GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0046872 F metal ion binding
6605	O_BomaMG2003_3prime_partial:A_BomaMG_comp13105_c0_seq1 307bp		PREDICTED:_interleukin_enhancer_binding_factor_isoform_X2_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0003677 F DNA binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006955 P immune response GO:0016740 F transferase activity GO:0045893 P positive regulation of transcription, DNA-templated GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome
6606	O_BomaMG20040_complete:A_BomaMG_comp25731_c1_seq1 517bp			GO:0003824 F catalytic activity GO:0004021 F L-alanine:2-oxoglutarate aminotransferase activity GO:0006103 P 2-oxoglutarate metabolic process GO:0008483 F transaminase activity GO:0009058 P biosynthetic process GO:0016740 F transferase activity GO:0030170 F pyridoxal phosphate binding GO:0042851 P L-alanine metabolic process GO:0042853 P L-alanine catabolic process
6607	O_BomaMG20041_internal:A_BomaMG_comp25732_c0_seq1 175bp
6608	O_BomaMG20043_internal:A_BomaMG_comp25732_c0_seq2 127bp
6609	O_BomaMG20046_internal:A_BomaMG_comp25732_c0_seq3 138bp
6610	O_BomaMG20047_internal:A_BomaMG_comp25732_c0_seq4 182bp
6611	O_BomaMG20049_5prime_partial:A_BomaMG_comp25732_c0_seq5 1786bp
6612	O_BomaMG2004_3prime_partial:A_BomaMG_comp13107_c0_seq1 403bp		PREDICTED:_general_transcription_factor_IIH_subunit_2_[Papilio_polytes]	GO:0000439 C transcription factor TFIIH core complex GO:0003674 F molecular_function GO:0004672 F protein kinase activity GO:0005575 C cellular_component GO:0005634 C nucleus GO:0005675 C transcription factor TFIIH holo complex GO:0006281 P DNA repair GO:0006289 P nucleotide-excision repair GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0006468 P protein phosphorylation GO:0006974 P cellular response to DNA damage stimulus GO:0008094 F ATP-dependent activity, acting on DNA GO:0008150 P biological_process GO:0008270 F zinc ion binding GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity GO:0046872 F metal ion binding
6613	O_BomaMG20058_internal:A_BomaMG_comp25732_c0_seq6 132bp
6614	O_BomaMG20059_internal:A_BomaMG_comp25732_c0_seq7 318bp
6615	O_BomaMG2005_internal:A_BomaMG_comp13111_c0_seq1 406bp		PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006139 P nucleobase-containing compound metabolic process GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006397 P mRNA processing GO:0006810 P transport GO:0008380 P RNA splicing GO:0010793 P regulation of mRNA export from nucleus GO:0016032 P viral process GO:0032784 P regulation of DNA-templated transcription, elongation GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter GO:0042393 F histone binding GO:0044822 F RNA binding GO:0045191 P regulation of isotype switching GO:0050684 P regulation of mRNA processing GO:0051028 P mRNA transport GO:0051147 P regulation of muscle cell differentiation GO:0061086 P negative regulation of histone H3-K27 methylation
6616	O_BomaMG20060_internal:A_BomaMG_comp25732_c0_seq7 318bp
6617	O_BomaMG20061_internal:A_BomaMG_comp25732_c0_seq8 233bp
6618	O_BomaMG20063_internal:A_BomaMG_comp25732_c0_seq9 163bp
6619	O_BomaMG20065_internal:A_BomaMG_comp25732_c0_seq10 157bp
6620	O_BomaMG20066_internal:A_BomaMG_comp25732_c0_seq11 174bp
6621	O_BomaMG20068_5prime_partial:A_BomaMG_comp25732_c0_seq12 226bp			GO:0005576 C extracellular region GO:0006030 P chitin metabolic process GO:0008061 F chitin binding
6622	O_BomaMG20069_5prime_partial:A_BomaMG_comp25732_c0_seq13 1785bp
6623	O_BomaMG20079_internal:A_BomaMG_comp25732_c0_seq14 178bp
6624	O_BomaMG2007_internal:A_BomaMG_comp13111_c0_seq2 533bp		PREDICTED:_transcription_elongation_factor_SPT6_[Bombyx_mori]	GO:0000176 C nuclear exosome (RNase complex) GO:0002805 P regulation of antimicrobial peptide biosynthetic process GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0005634 C nucleus GO:0005703 C polytene chromosome puff GO:0005705 C polytene chromosome interband GO:0006139 P nucleobase-containing compound metabolic process GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0008023 C transcription elongation factor complex GO:0030707 P ovarian follicle cell development GO:0032784 P regulation of DNA-templated transcription, elongation GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter GO:0035101 C FACT complex GO:0035327 C euchromatin GO:0035363 C histone locus body
6625	O_BomaMG20081_internal:A_BomaMG_comp25732_c0_seq15 171bp
6626	O_BomaMG20083_5prime_partial:A_BomaMG_comp25732_c0_seq16 225bp			GO:0005576 C extracellular region GO:0006030 P chitin metabolic process GO:0008061 F chitin binding
6627	O_BomaMG20086_complete:A_BomaMG_comp25733_c1_seq1 136bp			GO:0005737 C cytoplasm GO:0006457 P protein folding GO:0016272 C prefoldin complex GO:0051082 F unfolded protein binding GO:0051087 F chaperone binding
6628	O_BomaMG20087_complete:A_BomaMG_comp25733_c4_seq3 436bp			GO:0000287 F magnesium ion binding GO:0004450 F isocitrate dehydrogenase (NADP+) activity GO:0005739 C mitochondrion GO:0006097 P glyoxylate cycle GO:0006099 P tricarboxylic acid cycle GO:0006102 P isocitrate metabolic process GO:0006103 P 2-oxoglutarate metabolic process GO:0016491 F oxidoreductase activity GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0046872 F metal ion binding GO:0051287 F NAD binding GO:0055114 P obsolete oxidation-reduction process
6629	O_BomaMG20088_complete:A_BomaMG_comp25733_c5_seq2 418bp			GO:0005243 F gap junction channel activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005921 C gap junction GO:0006810 P transport GO:0006811 P ion transport GO:0007476 P imaginal disc-derived wing morphogenesis GO:0010496 P intercellular transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0055085 P transmembrane transport GO:0072375 P medium-term memory
6630	O_BomaMG20091_5prime_partial:A_BomaMG_comp25733_c5_seq5 209bp			GO:0004177 F aminopeptidase activity GO:0005886 C plasma membrane GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0031225 C anchored component of membrane GO:0046872 F metal ion binding