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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
571 O_BomaMG10766_5prime_partial:A_BomaMG_comp23454_c0_seq1
365bp
PREDICTED:_mitochondrial_genome_maintenance_exonuclease_1-like_[Amyelois_transitella]
GO:0000002 P mitochondrial genome maintenance
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005739 C mitochondrion
GO:0006264 P mitochondrial DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008297 F single-stranded DNA exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0043504 P mitochondrial DNA repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
572 O_BomaMG10768_5prime_partial:A_BomaMG_comp23454_c0_seq2
360bp
PREDICTED:_mitochondrial_genome_maintenance_exonuclease_1-like_[Amyelois_transitella]
GO:0000002 P mitochondrial genome maintenance
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005739 C mitochondrion
GO:0006264 P mitochondrial DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008297 F single-stranded DNA exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0043504 P mitochondrial DNA repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
573 O_BomaMG1076_internal:A_BomaMG_comp11897_c0_seq1
341bp
Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
574 O_BomaMG10770_complete:A_BomaMG_comp23454_c0_seq3
395bp
PREDICTED:_mitochondrial_genome_maintenance_exonuclease_1-like_[Amyelois_transitella]
GO:0000002 P mitochondrial genome maintenance
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005739 C mitochondrion
GO:0006264 P mitochondrial DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008297 F single-stranded DNA exodeoxyribonuclease activity
GO:0016787 F hydrolase activity
GO:0043504 P mitochondrial DNA repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
575 O_BomaMG10773_3prime_partial:A_BomaMG_comp23456_c0_seq1
381bp
PREDICTED:_DALR_anticodon-binding_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004814 F arginine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006420 P arginyl-tRNA aminoacylation
GO:0008150 P biological_process
576 O_BomaMG10774_5prime_partial:A_BomaMG_comp23457_c0_seq1
129bp
DnaJ-like_subfamily_C_member_1_[Papilio_machaon]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006417 P regulation of translation
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031090 C organelle membrane
GO:0031965 C nuclear membrane
GO:0043022 F ribosome binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0050708 P regulation of protein secretion
GO:0051087 F chaperone binding
577 O_BomaMG10775_3prime_partial:A_BomaMG_comp23458_c0_seq1
227bp
PREDICTED:_probable_dynactin_subunit_2_[Papilio_xuthus]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007067 P mitotic cell cycle
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0030286 C dynein complex
GO:0031982 C vesicle
578 O_BomaMG10776_3prime_partial:A_BomaMG_comp23459_c1_seq1
207bp
PREDICTED:_uncharacterized_protein_LOC100902684_[Metaseiulus_occidentalis]
579 O_BomaMG10777_internal:A_BomaMG_comp23459_c2_seq1
155bp
hypothetical_protein_M153_25190001811_[Pseudoloma_neurophilia]
580 O_BomaMG10778_internal:A_BomaMG_comp23461_c2_seq2
134bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
581 O_BomaMG10779_complete:A_BomaMG_comp23463_c0_seq1
891bp
PREDICTED:_uncharacterized_protein_LOC106140823_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007130 P synaptonemal complex assembly
GO:0007143 P female meiotic nuclear division
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0022008 P neurogenesis
GO:0030717 P oocyte karyosome formation
GO:0035184 F histone threonine kinase activity
GO:0035405 P histone-threonine phosphorylation
GO:0036098 P male germ-line stem cell population maintenance
GO:0036099 P female germ-line stem cell population maintenance
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0097150 P neuronal stem cell population maintenance
GO:2001020 P regulation of response to DNA damage stimulus
582 O_BomaMG1077_internal:A_BomaMG_comp11897_c1_seq1
211bp
Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
583 O_BomaMG10782_complete:A_BomaMG_comp23463_c0_seq2
891bp
PREDICTED:_uncharacterized_protein_LOC106140823_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007130 P synaptonemal complex assembly
GO:0007143 P female meiotic nuclear division
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0022008 P neurogenesis
GO:0030717 P oocyte karyosome formation
GO:0035184 F histone threonine kinase activity
GO:0035405 P histone-threonine phosphorylation
GO:0036098 P male germ-line stem cell population maintenance
GO:0036099 P female germ-line stem cell population maintenance
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0097150 P neuronal stem cell population maintenance
GO:2001020 P regulation of response to DNA damage stimulus
584 O_BomaMG10785_complete:A_BomaMG_comp23464_c0_seq1
759bp
PREDICTED:_FYVE,_RhoGEF_and_PH_domain-containing_protein_3-like_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0090630 P activation of GTPase activity
585 O_BomaMG10786_complete:A_BomaMG_comp23464_c0_seq2
773bp
PREDICTED:_FYVE,_RhoGEF_and_PH_domain-containing_protein_3-like_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0090630 P activation of GTPase activity
586 O_BomaMG10787_5prime_partial:A_BomaMG_comp23465_c2_seq1
1081bp
PREDICTED:_uncharacterized_protein_LOC105842420_[Bombyx_mori]
587 O_BomaMG10791_5prime_partial:A_BomaMG_comp23467_c0_seq1
245bp
PREDICTED:_caskin-2_isoform_X6_[Bombyx_mori]
588 O_BomaMG10794_internal:A_BomaMG_comp23467_c1_seq1
139bp
PREDICTED:_caskin-2_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
589 O_BomaMG10795_internal:A_BomaMG_comp23467_c1_seq2
177bp
PREDICTED:_caskin-2_isoform_X6_[Bombyx_mori]
590 O_BomaMG10796_3prime_partial:A_BomaMG_comp23467_c2_seq1
278bp
PREDICTED:_caskin-2_isoform_X5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0008150 P biological_process
591 O_BomaMG10798_complete:A_BomaMG_comp23470_c0_seq1
430bp
PREDICTED:_phosphatidylinositol_glycan_anchor_biosynthesis_class_U_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042765 C GPI-anchor transamidase complex
592 O_BomaMG10799_5prime_partial:A_BomaMG_comp23471_c1_seq1
341bp
PREDICTED:_beta-1,3-galactosyltransferase_4-like,_partial_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008378 F galactosyltransferase activity
GO:0008457 F beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0047256 F lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity
593 O_BomaMG1079_5prime_partial:A_BomaMG_comp11901_c0_seq1
100bp
DNA-C5-methyltransferase-1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0090116 P C-5 methylation of cytosine
594 O_BomaMG107_complete:A_BomaMG_comp1272_c0_seq1
240bp
hypothetical_protein_RR46_01282_[Papilio_xuthus]
595 O_BomaMG10800_complete:A_BomaMG_comp23471_c2_seq1
882bp
putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_prp22_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
596 O_BomaMG10802_complete:A_BomaMG_comp23472_c0_seq1
546bp
PREDICTED:_FGGY_carbohydrate_kinase_domain-containing_protein_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0070050 P neuron cellular homeostasis
597 O_BomaMG10803_complete:A_BomaMG_comp23476_c0_seq2
280bp
Carbonyl_reductase_[NADPH]_1_[Papilio_xuthus]
GO:0000253 F 3-keto sterol reductase activity
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042376 P phylloquinone catabolic process
GO:0050890 P cognition
GO:0055114 P obsolete oxidation-reduction process
GO:0070402 F NADPH binding
598 O_BomaMG10804_complete:A_BomaMG_comp23477_c0_seq1
410bp
putative_cop9_complex_subunit_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008021 C synaptic vesicle
GO:0008180 C COP9 signalosome
GO:0010388 P protein deneddylation
GO:0019784 F NEDD8-specific protease activity
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
599 O_BomaMG10805_internal:A_BomaMG_comp23478_c0_seq1
365bp
PREDICTED:_uncharacterized_protein_LOC106124377_isoform_X2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007275 P multicellular organism development
GO:0045665 P negative regulation of neuron differentiation
GO:0045747 P positive regulation of Notch signaling pathway
600 O_BomaMG10806_complete:A_BomaMG_comp23479_c0_seq1
358bp
PREDICTED:_protein_flightless-1_homolog_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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