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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5251 O_BomaMG17843_3prime_partial:A_BomaMG_comp25511_c0_seq9
444bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
5252 O_BomaMG17846_3prime_partial:A_BomaMG_comp25511_c0_seq10
338bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
5253 O_BomaMG17849_internal:A_BomaMG_comp25511_c0_seq11
168bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
5254 O_BomaMG17850_complete:A_BomaMG_comp25513_c0_seq1
879bp
GO:0000166 F nucleotide binding
GO:0001726 C ruffle
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0010761 P fibroblast migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0019900 F kinase binding
GO:0030027 C lamellipodium
GO:0031532 P actin cytoskeleton reorganization
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048041 P focal adhesion assembly
GO:0060326 P cell chemotaxis
GO:0072661 P protein localization to plasma membrane
GO:0090630 P activation of GTPase activity
GO:0097178 P ruffle assembly
5255 O_BomaMG17852_3prime_partial:A_BomaMG_comp25514_c0_seq1
847bp
GO:0000139 C Golgi membrane
GO:0005179 F hormone activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
5256 O_BomaMG17856_3prime_partial:A_BomaMG_comp25514_c0_seq2
842bp
GO:0000139 C Golgi membrane
GO:0005179 F hormone activity
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
5257 O_BomaMG17861_complete:A_BomaMG_comp25515_c3_seq4
394bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5258 O_BomaMG17864_complete:A_BomaMG_comp25516_c0_seq1
900bp
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030158 F protein xylosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0042732 P D-xylose metabolic process
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
5259 O_BomaMG17865_3prime_partial:A_BomaMG_comp25517_c0_seq1
412bp
GO:0005515 F protein binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5260 O_BomaMG17867_3prime_partial:A_BomaMG_comp25517_c0_seq2
412bp
GO:0005515 F protein binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5261 O_BomaMG17869_3prime_partial:A_BomaMG_comp25517_c0_seq3
275bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5262 O_BomaMG1786_complete:A_BomaMG_comp12839_c0_seq1
368bp
PREDICTED:_ribosome_biogenesis_protein_BRX1_homolog_[Papilio_xuthus]
GO:0000027 P ribosomal large subunit assembly
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
5263 O_BomaMG17872_3prime_partial:A_BomaMG_comp25517_c0_seq4
275bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5264 O_BomaMG17875_3prime_partial:A_BomaMG_comp25517_c0_seq6
700bp
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015248 F sterol transporter activity
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0044128 P obsolete positive regulation of growth of symbiont in host
GO:0048471 C perinuclear region of cytoplasm
GO:0070273 F phosphatidylinositol-4-phosphate binding
5265 O_BomaMG17877_complete:A_BomaMG_comp25517_c0_seq7
576bp
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015248 F sterol transporter activity
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0044128 P obsolete positive regulation of growth of symbiont in host
GO:0048471 C perinuclear region of cytoplasm
GO:0070273 F phosphatidylinositol-4-phosphate binding
5266 O_BomaMG17879_3prime_partial:A_BomaMG_comp25517_c0_seq8
563bp
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0015248 F sterol transporter activity
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0044128 P obsolete positive regulation of growth of symbiont in host
GO:0048471 C perinuclear region of cytoplasm
GO:0070273 F phosphatidylinositol-4-phosphate binding
5267 O_BomaMG1787_complete:A_BomaMG_comp12846_c0_seq1
269bp
PREDICTED:_26S_proteasome_non-ATPase_regulatory_subunit_8_[Papilio_machaon]
GO:0000502 C proteasome complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006508 P proteolysis
GO:0008541 C proteasome regulatory particle, lid subcomplex
GO:0022624 C proteasome accessory complex
GO:0031647 P regulation of protein stability
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043248 P proteasome assembly
GO:0070062 C extracellular exosome
GO:1903955 P positive regulation of protein targeting to mitochondrion
5268 O_BomaMG17882_3prime_partial:A_BomaMG_comp25517_c0_seq9
204bp
GO:0005515 F protein binding
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5269 O_BomaMG17883_3prime_partial:A_BomaMG_comp25517_c0_seq10
132bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5270 O_BomaMG17884_complete:A_BomaMG_comp25517_c0_seq12
288bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5271 O_BomaMG17886_complete:A_BomaMG_comp25517_c0_seq13
288bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007286 P spermatid development
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0097440 C apical dendrite
5272 O_BomaMG17888_3prime_partial:A_BomaMG_comp25518_c0_seq1
746bp
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005516 F calmodulin binding
GO:0005543 F phospholipid binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0016199 P axon midline choice point recognition
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030424 C axon
GO:0030506 F ankyrin binding
GO:0030721 P spectrosome organization
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0072499 P photoreceptor cell axon guidance
5273 O_BomaMG1788_complete:A_BomaMG_comp12848_c0_seq1
112bp
Uncharacterized_protein_OBRU01_15893_[Operophtera_brumata]
5274 O_BomaMG17891_3prime_partial:A_BomaMG_comp25518_c0_seq2
786bp
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005516 F calmodulin binding
GO:0005543 F phospholipid binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0016199 P axon midline choice point recognition
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030424 C axon
GO:0030506 F ankyrin binding
GO:0030721 P spectrosome organization
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0072499 P photoreceptor cell axon guidance
5275 O_BomaMG17894_complete:A_BomaMG_comp25519_c0_seq1
1126bp
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006508 P proteolysis
GO:0007160 P cell-matrix adhesion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0030167 P proteoglycan catabolic process
GO:0031012 C extracellular matrix
GO:0032331 P negative regulation of chondrocyte differentiation
GO:0046872 F metal ion binding
GO:0050727 P regulation of inflammatory response
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0071347 P cellular response to interleukin-1
GO:0071356 P cellular response to tumor necrosis factor
GO:0071773 P cellular response to BMP stimulus
GO:1901509 P regulation of endothelial tube morphogenesis
GO:1902203 P negative regulation of hepatocyte growth factor receptor signaling pathway
GO:1902548 P negative regulation of cellular response to vascular endothelial growth factor stimulus
GO:2001113 P negative regulation of cellular response to hepatocyte growth factor stimulus
5276 O_BomaMG17897_5prime_partial:A_BomaMG_comp25521_c0_seq1
302bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
5277 O_BomaMG1789_5prime_partial:A_BomaMG_comp12851_c0_seq1
229bp
mRNA_cap-binding_protein_eIF4E_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000339 F RNA cap binding
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0000932 C P-body
GO:0001558 P regulation of cell growth
GO:0002191 P cap-dependent translational initiation
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005845 C mRNA cap binding complex
GO:0005875 C microtubule associated complex
GO:0006325 P chromatin organization
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0007052 P mitotic spindle organization
GO:0007060 P male meiosis chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007112 P male meiosis cytokinesis
GO:0010032 P meiotic chromosome condensation
GO:0016070 P RNA metabolic process
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016321 P female meiosis chromosome segregation
GO:0022008 P neurogenesis
GO:0030307 P positive regulation of cell growth
GO:0031370 F eukaryotic initiation factor 4G binding
GO:0031594 C neuromuscular junction
GO:0035071 P salivary gland cell autophagic cell death
GO:0045995 P regulation of embryonic development
GO:0048102 P autophagic cell death
GO:0048136 P male germ-line cyst formation
GO:0048137 P spermatocyte division
GO:0048515 P spermatid differentiation
GO:0097482 C muscle cell postsynaptic specialization
5278 O_BomaMG178_internal:A_BomaMG_comp1979_c0_seq1
171bp
PREDICTED:_rho_guanine_nucleotide_exchange_factor_17_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
5279 O_BomaMG17900_complete:A_BomaMG_comp25523_c0_seq2
199bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006310 P DNA recombination
GO:0032196 P transposition
GO:0046983 F protein dimerization activity
5280 O_BomaMG17901_complete:A_BomaMG_comp25523_c0_seq2
191bp
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
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