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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4951 O_BomaMG17397_complete:A_BomaMG_comp25443_c6_seq2
534bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4952 O_BomaMG1739_complete:A_BomaMG_comp12760_c0_seq1
637bp
PREDICTED:_translation_factor_GUF1_homolog,_mitochondrial_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
4953 O_BomaMG17400_complete:A_BomaMG_comp25443_c6_seq3
534bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4954 O_BomaMG17403_complete:A_BomaMG_comp25443_c7_seq1
221bp
GO:0000774 F adenyl-nucleotide exchange factor activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
GO:0006626 P protein targeting to mitochondrion
GO:0022008 P neurogenesis
GO:0042803 F protein homodimerization activity
GO:0050790 P regulation of catalytic activity
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
4955 O_BomaMG17404_3prime_partial:A_BomaMG_comp25443_c7_seq2
125bp
GO:0005887 C integral component of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
4956 O_BomaMG17405_complete:A_BomaMG_comp25443_c7_seq3
133bp
GO:0005887 C integral component of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
4957 O_BomaMG17406_complete:A_BomaMG_comp25443_c7_seq5
221bp
GO:0000774 F adenyl-nucleotide exchange factor activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
GO:0006626 P protein targeting to mitochondrion
GO:0022008 P neurogenesis
GO:0042803 F protein homodimerization activity
GO:0050790 P regulation of catalytic activity
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
4958 O_BomaMG17407_complete:A_BomaMG_comp25443_c7_seq7
279bp
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4959 O_BomaMG17408_complete:A_BomaMG_comp25443_c7_seq9
279bp
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4960 O_BomaMG17409_3prime_partial:A_BomaMG_comp25443_c8_seq1
513bp
4961 O_BomaMG1740_complete:A_BomaMG_comp12766_c0_seq2
230bp
PREDICTED:_lysophospholipase-like_protein_1_[Bombyx_mori]
GO:0002084 P protein depalmitoylation
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
4962 O_BomaMG17410_3prime_partial:A_BomaMG_comp25443_c8_seq2
762bp
4963 O_BomaMG17411_complete:A_BomaMG_comp25443_c8_seq3
480bp
4964 O_BomaMG17413_3prime_partial:A_BomaMG_comp25443_c8_seq4
385bp
4965 O_BomaMG17414_5prime_partial:A_BomaMG_comp25443_c9_seq1
341bp
4966 O_BomaMG17417_complete:A_BomaMG_comp25444_c0_seq1
137bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
4967 O_BomaMG17418_complete:A_BomaMG_comp25444_c0_seq2
442bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000983 F RNA polymerase II general transcription initiation factor activity
GO:0000988 F obsolete transcription factor activity, protein binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001568 P blood vessel development
GO:0001570 P vasculogenesis
GO:0003150 P muscular septum morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003171 P atrioventricular valve development
GO:0003184 P pulmonary valve morphogenesis
GO:0003186 P tricuspid valve morphogenesis
GO:0003195 P tricuspid valve formation
GO:0003199 P endocardial cushion to mesenchymal transition involved in heart valve formation
GO:0003208 P cardiac ventricle morphogenesis
GO:0003214 P cardiac left ventricle morphogenesis
GO:0003215 P cardiac right ventricle morphogenesis
GO:0003222 P ventricular trabecula myocardium morphogenesis
GO:0003300 P cardiac muscle hypertrophy
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007389 P pattern specification process
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0009948 P anterior/posterior axis specification
GO:0010460 P positive regulation of heart rate
GO:0010468 P regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0014031 P mesenchymal cell development
GO:0014898 P cardiac muscle hypertrophy in response to stress
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0035910 P ascending aorta morphogenesis
GO:0035912 P dorsal aorta morphogenesis
GO:0035939 F microsatellite binding
GO:0036304 P umbilical cord morphogenesis
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045607 P regulation of inner ear auditory receptor cell differentiation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055015 P ventricular cardiac muscle cell development
GO:0060045 P positive regulation of cardiac muscle cell proliferation
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060347 P heart trabecula formation
GO:0060411 P cardiac septum morphogenesis
GO:0060412 P ventricular septum morphogenesis
GO:0060413 P atrial septum morphogenesis
GO:0060633 P negative regulation of transcription initiation from RNA polymerase II promoter
GO:0060716 P labyrinthine layer blood vessel development
GO:0060840 P artery development
GO:0060842 P arterial endothelial cell differentiation
GO:0060948 P cardiac vascular smooth muscle cell development
GO:0060977 P coronary vasculature morphogenesis
GO:0061156 P pulmonary artery morphogenesis
GO:0061314 P Notch signaling involved in heart development
GO:0065004 P protein-DNA complex assembly
GO:0090102 P cochlea development
GO:0097084 P vascular associated smooth muscle cell development
GO:2000678 P negative regulation of transcription regulatory region DNA binding
GO:2000820 P negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation
GO:2001212 P regulation of vasculogenesis
4968 O_BomaMG1741_internal:A_BomaMG_comp12767_c0_seq1
257bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
4969 O_BomaMG17420_complete:A_BomaMG_comp25444_c0_seq3
336bp
4970 O_BomaMG17421_complete:A_BomaMG_comp25445_c0_seq1
1120bp
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0032481 P positive regulation of type I interferon production
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
4971 O_BomaMG17422_complete:A_BomaMG_comp25445_c0_seq2
1120bp
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0032481 P positive regulation of type I interferon production
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
4972 O_BomaMG17423_complete:A_BomaMG_comp25445_c0_seq2
517bp
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
4973 O_BomaMG17424_5prime_partial:A_BomaMG_comp25446_c1_seq1
264bp
4974 O_BomaMG17425_complete:A_BomaMG_comp25446_c1_seq2
175bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
4975 O_BomaMG17427_5prime_partial:A_BomaMG_comp25446_c1_seq3
719bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
4976 O_BomaMG17429_complete:A_BomaMG_comp25446_c1_seq4
430bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
4977 O_BomaMG17431_5prime_partial:A_BomaMG_comp25446_c4_seq1
543bp
GO:0001618 F virus receptor activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0007628 P adult walking behavior
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016242 P negative regulation of macroautophagy
GO:0030301 P cholesterol transport
GO:0031579 P membrane raft organization
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042632 P cholesterol homeostasis
GO:0045121 C membrane raft
GO:0046686 P response to cadmium ion
GO:0046718 P viral entry into host cell
GO:0048471 C perinuclear region of cytoplasm
GO:0060548 P negative regulation of cell death
GO:0070062 C extracellular exosome
GO:0071383 P cellular response to steroid hormone stimulus
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:0090150 P establishment of protein localization to membrane
GO:2000189 P cholesterol homeostasis
4978 O_BomaMG17432_complete:A_BomaMG_comp25446_c8_seq1
317bp
4979 O_BomaMG17434_complete:A_BomaMG_comp25446_c8_seq2
317bp
4980 O_BomaMG17436_complete:A_BomaMG_comp25446_c8_seq6
317bp
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