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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3841 O_BomaMG15617_complete:A_BomaMG_comp25111_c0_seq1
498bp
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010165 P response to X-ray
GO:0010623 P programmed cell death involved in cell development
GO:0012501 P programmed cell death
GO:0016322 P neuron remodeling
GO:0016787 F hydrolase activity
GO:0035070 P salivary gland histolysis
GO:0035103 P sterol regulatory element binding protein cleavage
GO:0045476 P nurse cell apoptotic process
GO:0046668 P regulation of retinal cell programmed cell death
GO:0046672 P positive regulation of compound eye retinal cell programmed cell death
GO:0048515 P spermatid differentiation
GO:0097153 F cysteine-type endopeptidase activity involved in apoptotic process
GO:0097194 P execution phase of apoptosis
GO:0097200 F cysteine-type endopeptidase activity involved in execution phase of apoptosis
GO:1990525 F BIR domain binding
GO:2001269 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
3842 O_BomaMG15618_complete:A_BomaMG_comp25111_c0_seq2
437bp
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010165 P response to X-ray
GO:0010623 P programmed cell death involved in cell development
GO:0012501 P programmed cell death
GO:0016322 P neuron remodeling
GO:0016787 F hydrolase activity
GO:0035070 P salivary gland histolysis
GO:0035103 P sterol regulatory element binding protein cleavage
GO:0045476 P nurse cell apoptotic process
GO:0046668 P regulation of retinal cell programmed cell death
GO:0046672 P positive regulation of compound eye retinal cell programmed cell death
GO:0048515 P spermatid differentiation
GO:0097153 F cysteine-type endopeptidase activity involved in apoptotic process
GO:0097194 P execution phase of apoptosis
GO:0097200 F cysteine-type endopeptidase activity involved in execution phase of apoptosis
GO:1990525 F BIR domain binding
GO:2001269 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
3843 O_BomaMG15619_complete:A_BomaMG_comp25112_c0_seq1
109bp
GO:0005739 C mitochondrion
3844 O_BomaMG1561_complete:A_BomaMG_comp12519_c0_seq1
416bp
PREDICTED:_protein_FAM46C_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3845 O_BomaMG15620_complete:A_BomaMG_comp25112_c0_seq2
277bp
GO:0048511 P rhythmic process
3846 O_BomaMG15621_complete:A_BomaMG_comp25112_c0_seq2
109bp
GO:0005739 C mitochondrion
3847 O_BomaMG15623_complete:A_BomaMG_comp25112_c0_seq3
109bp
GO:0005739 C mitochondrion
3848 O_BomaMG15624_complete:A_BomaMG_comp25112_c0_seq4
109bp
GO:0005739 C mitochondrion
3849 O_BomaMG15625_complete:A_BomaMG_comp25112_c0_seq4
102bp
GO:0048511 P rhythmic process
3850 O_BomaMG15626_5prime_partial:A_BomaMG_comp25113_c1_seq1
242bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
3851 O_BomaMG15627_5prime_partial:A_BomaMG_comp25113_c1_seq2
280bp
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0046907 P intracellular transport
3852 O_BomaMG15628_5prime_partial:A_BomaMG_comp25113_c1_seq3
148bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005543 F phospholipid binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0008150 P biological_process
GO:0016020 C membrane
3853 O_BomaMG15631_complete:A_BomaMG_comp25114_c0_seq1
102bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3854 O_BomaMG15632_complete:A_BomaMG_comp25115_c0_seq1
760bp
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
3855 O_BomaMG15635_complete:A_BomaMG_comp25116_c0_seq1
1061bp
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
3856 O_BomaMG15637_complete:A_BomaMG_comp25117_c0_seq1
945bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3857 O_BomaMG15640_complete:A_BomaMG_comp25117_c0_seq2
881bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3858 O_BomaMG15643_complete:A_BomaMG_comp25117_c0_seq3
824bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3859 O_BomaMG15646_complete:A_BomaMG_comp25117_c0_seq4
989bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3860 O_BomaMG15649_complete:A_BomaMG_comp25117_c0_seq5
1026bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3861 O_BomaMG1564_complete:A_BomaMG_comp12521_c0_seq1
160bp
troponin_C_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0046872 F metal ion binding
3862 O_BomaMG15652_complete:A_BomaMG_comp25117_c0_seq6
969bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3863 O_BomaMG15655_complete:A_BomaMG_comp25117_c0_seq7
932bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3864 O_BomaMG15658_complete:A_BomaMG_comp25117_c0_seq8
301bp
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006979 P response to oxidative stress
GO:0007628 P adult walking behavior
GO:0016491 F oxidoreductase activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0055114 P obsolete oxidation-reduction process
GO:0071447 P cellular response to hydroperoxide
3865 O_BomaMG1565_complete:A_BomaMG_comp12522_c0_seq1
329bp
PREDICTED:_uncharacterized_protein_LOC106142738_[Amyelois_transitella]
3866 O_BomaMG15660_complete:A_BomaMG_comp25117_c0_seq9
1002bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
3867 O_BomaMG15663_3prime_partial:A_BomaMG_comp25118_c0_seq1
511bp
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006302 P double-strand break repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016575 P histone deacetylation
GO:0016925 P protein sumoylation
GO:0032496 P response to lipopolysaccharide
GO:0032922 P circadian regulation of gene expression
GO:0040029 P regulation of gene expression, epigenetic
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043565 F sequence-specific DNA binding
GO:0045475 P locomotor rhythm
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0050727 P regulation of inflammatory response
GO:1902499 P positive regulation of protein autoubiquitination
GO:1903507 P negative regulation of nucleic acid-templated transcription
3868 O_BomaMG15664_3prime_partial:A_BomaMG_comp25119_c0_seq1
461bp
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008152 P metabolic process
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
3869 O_BomaMG15669_3prime_partial:A_BomaMG_comp25119_c0_seq2
158bp
GO:0000228 C nuclear chromosome
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
3870 O_BomaMG15672_complete:A_BomaMG_comp25119_c0_seq3
292bp
GO:0000228 C nuclear chromosome
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0031492 F nucleosomal DNA binding
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0071564 C npBAF complex
GO:0071565 C nBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
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