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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3781 O_BomaMG15531_complete:A_BomaMG_comp25085_c1_seq2
275bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007629 P flight behavior
GO:0030018 C Z disc
GO:0031532 P actin cytoskeleton reorganization
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0051017 P actin filament bundle assembly
3782 O_BomaMG15532_complete:A_BomaMG_comp25085_c1_seq2
147bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008150 P biological_process
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0030097 P hemopoiesis
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
3783 O_BomaMG15535_complete:A_BomaMG_comp25085_c1_seq3
662bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007629 P flight behavior
GO:0030018 C Z disc
GO:0031532 P actin cytoskeleton reorganization
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0051017 P actin filament bundle assembly
3784 O_BomaMG15536_complete:A_BomaMG_comp25085_c1_seq3
238bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0046872 F metal ion binding
3785 O_BomaMG15537_complete:A_BomaMG_comp25085_c1_seq3
147bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008150 P biological_process
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0030097 P hemopoiesis
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
3786 O_BomaMG15540_complete:A_BomaMG_comp25085_c1_seq4
863bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007629 P flight behavior
GO:0030018 C Z disc
GO:0031532 P actin cytoskeleton reorganization
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0051017 P actin filament bundle assembly
3787 O_BomaMG15541_complete:A_BomaMG_comp25085_c1_seq4
147bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008150 P biological_process
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0030097 P hemopoiesis
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
3788 O_BomaMG15544_complete:A_BomaMG_comp25086_c0_seq2
312bp
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0043565 F sequence-specific DNA binding
3789 O_BomaMG15545_complete:A_BomaMG_comp25086_c0_seq3
366bp
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0043565 F sequence-specific DNA binding
3790 O_BomaMG15547_complete:A_BomaMG_comp25087_c0_seq1
131bp
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0005687 C U4 snRNP
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0034709 C methylosome
GO:0034715 C pICln-Sm protein complex
GO:0034719 C SMN-Sm protein complex
GO:0071208 F histone pre-mRNA DCP binding
3791 O_BomaMG15548_complete:A_BomaMG_comp25088_c0_seq1
840bp
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
3792 O_BomaMG15549_5prime_partial:A_BomaMG_comp25088_c0_seq2
207bp
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
3793 O_BomaMG15550_complete:A_BomaMG_comp25089_c1_seq1
367bp
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006829 P zinc ion transport
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030001 P metal ion transport
GO:0046873 F metal ion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0071577 P zinc ion transmembrane transport
3794 O_BomaMG15551_internal:A_BomaMG_comp25090_c1_seq1
1865bp
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000785 C chromatin
GO:0000910 P cytokinesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0015031 P protein transport
GO:0016363 C nuclear matrix
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0051301 P cell division
GO:0070062 C extracellular exosome
3795 O_BomaMG15558_internal:A_BomaMG_comp25093_c0_seq1
1429bp
GO:0002446 P neutrophil mediated immunity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030854 P positive regulation of granulocyte differentiation
GO:0032259 P methylation
GO:0042119 P neutrophil activation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048384 P retinoic acid receptor signaling pathway
GO:0051568 P histone H3-K4 methylation
GO:0070688 C obsolete MLL5-L complex
GO:0071300 P cellular response to retinoic acid
3796 O_BomaMG1555_5prime_partial:A_BomaMG_comp12508_c0_seq1
550bp
eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
3797 O_BomaMG15561_5prime_partial:A_BomaMG_comp25094_c1_seq2
1164bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
3798 O_BomaMG15562_5prime_partial:A_BomaMG_comp25094_c1_seq4
1121bp
GO:0003824 F catalytic activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051044 P positive regulation of membrane protein ectodomain proteolysis
GO:0052548 P regulation of endopeptidase activity
3799 O_BomaMG15563_3prime_partial:A_BomaMG_comp25095_c0_seq1
428bp
3800 O_BomaMG15564_complete:A_BomaMG_comp25095_c0_seq2
360bp
3801 O_BomaMG15565_3prime_partial:A_BomaMG_comp25095_c0_seq3
444bp
3802 O_BomaMG15566_3prime_partial:A_BomaMG_comp25095_c0_seq4
321bp
3803 O_BomaMG15567_complete:A_BomaMG_comp25095_c0_seq5
317bp
3804 O_BomaMG15568_complete:A_BomaMG_comp25095_c0_seq6
360bp
3805 O_BomaMG15569_complete:A_BomaMG_comp25095_c0_seq7
317bp
3806 O_BomaMG15570_3prime_partial:A_BomaMG_comp25095_c0_seq8
321bp
3807 O_BomaMG15571_5prime_partial:A_BomaMG_comp25095_c0_seq9
184bp
3808 O_BomaMG15572_complete:A_BomaMG_comp25095_c0_seq10
360bp
3809 O_BomaMG15573_3prime_partial:A_BomaMG_comp25095_c0_seq11
364bp
3810 O_BomaMG15574_complete:A_BomaMG_comp25095_c0_seq12
440bp
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