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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3091 O_BomaMG14480_3prime_partial:A_BomaMG_comp24813_c0_seq1
695bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3092 O_BomaMG14481_3prime_partial:A_BomaMG_comp24813_c0_seq2
695bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3093 O_BomaMG14482_3prime_partial:A_BomaMG_comp24813_c0_seq4
704bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3094 O_BomaMG14483_3prime_partial:A_BomaMG_comp24813_c0_seq5
759bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3095 O_BomaMG14484_3prime_partial:A_BomaMG_comp24813_c0_seq6
695bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3096 O_BomaMG14485_3prime_partial:A_BomaMG_comp24813_c0_seq7
705bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
3097 O_BomaMG14487_internal:A_BomaMG_comp24814_c2_seq1
139bp
3098 O_BomaMG14488_complete:A_BomaMG_comp24815_c1_seq1
105bp
GO:0001652 C granular component
GO:0002039 F p53 binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006974 P cellular response to DNA damage stimulus
GO:0009967 P positive regulation of signal transduction
GO:0030307 P positive regulation of cell growth
GO:0030308 P negative regulation of cell growth
GO:0031647 P regulation of protein stability
3099 O_BomaMG14489_complete:A_BomaMG_comp24815_c4_seq1
131bp
3100 O_BomaMG14490_complete:A_BomaMG_comp24815_c4_seq3
131bp
3101 O_BomaMG14494_complete:A_BomaMG_comp24816_c0_seq1
304bp
GO:0000902 P cell morphogenesis
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0015629 C actin cytoskeleton
GO:0030031 P cell projection assembly
GO:0030833 P regulation of actin filament polymerization
GO:0030866 P cortical actin cytoskeleton organization
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0045179 C apical cortex
GO:0046331 P lateral inhibition
GO:0070938 C contractile ring
3102 O_BomaMG14496_3prime_partial:A_BomaMG_comp24817_c0_seq1
537bp
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
3103 O_BomaMG14497_internal:A_BomaMG_comp24817_c1_seq1
652bp
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
3104 O_BomaMG14499_5prime_partial:A_BomaMG_comp24819_c0_seq1
244bp
GO:0004742 F dihydrolipoyllysine-residue acetyltransferase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006090 P pyruvate metabolic process
GO:0006096 P glycolytic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0045254 C pyruvate dehydrogenase complex
3105 O_BomaMG1449_complete:A_BomaMG_comp12391_c0_seq1
148bp
ribosomal_protein_L22_[Bombyx_mori]
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
3106 O_BomaMG144_3prime_partial:A_BomaMG_comp1597_c0_seq1
123bp
cyclin_dependent_kinase_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0001726 C ruffle
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003323 P type B pancreatic cell development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007219 P Notch signaling pathway
GO:0009615 P response to virus
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0030332 F cyclin binding
GO:0033077 P T cell differentiation in thymus
GO:0042063 P gliogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042995 C cell projection
GO:0043697 P cell dedifferentiation
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045786 P negative regulation of cell cycle
GO:0048146 P positive regulation of fibroblast proliferation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051301 P cell division
GO:0060218 P hematopoietic stem cell differentiation
GO:2000773 P negative regulation of cellular senescence
3107 O_BomaMG14500_3prime_partial:A_BomaMG_comp24820_c8_seq2
109bp
3108 O_BomaMG14504_5prime_partial:A_BomaMG_comp24820_c10_seq6
126bp
3109 O_BomaMG14507_complete:A_BomaMG_comp24821_c0_seq1
606bp
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
3110 O_BomaMG14508_complete:A_BomaMG_comp24822_c0_seq1
698bp
GO:0005515 F protein binding
3111 O_BomaMG1450_3prime_partial:A_BomaMG_comp12393_c0_seq1
593bp
alpha-esterase_3_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
3112 O_BomaMG14510_complete:A_BomaMG_comp24822_c0_seq3
711bp
3113 O_BomaMG14512_3prime_partial:A_BomaMG_comp24823_c0_seq1
257bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
3114 O_BomaMG14514_3prime_partial:A_BomaMG_comp24823_c0_seq3
268bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
3115 O_BomaMG14516_complete:A_BomaMG_comp24823_c0_seq5
332bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
3116 O_BomaMG14518_complete:A_BomaMG_comp24823_c0_seq7
321bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
3117 O_BomaMG1451_complete:A_BomaMG_comp12394_c0_seq1
274bp
NIPSNAP_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3118 O_BomaMG14520_complete:A_BomaMG_comp24824_c0_seq1
373bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005791 C rough endoplasmic reticulum
GO:0006620 P posttranslational protein targeting to endoplasmic reticulum membrane
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016235 C aggresome
GO:0045111 C intermediate filament cytoskeleton
3119 O_BomaMG14521_complete:A_BomaMG_comp24825_c0_seq2
1051bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042393 F histone binding
GO:0045087 P innate immune response
3120 O_BomaMG14523_complete:A_BomaMG_comp24825_c0_seq3
1047bp
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0030695 F GTPase regulator activity
GO:0042393 F histone binding
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
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