SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16228
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2851 O_BomaMG14084_complete:A_BomaMG_comp24700_c0_seq1
607bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004887 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
2852 O_BomaMG14086_complete:A_BomaMG_comp24700_c0_seq2
754bp
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004887 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
2853 O_BomaMG14089_5prime_partial:A_BomaMG_comp24701_c1_seq1
105bp
2854 O_BomaMG14090_3prime_partial:A_BomaMG_comp24702_c1_seq1
171bp
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
2855 O_BomaMG14091_3prime_partial:A_BomaMG_comp24702_c1_seq2
243bp
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
2856 O_BomaMG14092_complete:A_BomaMG_comp24702_c1_seq3
159bp
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0016020 C membrane
GO:0032259 P methylation
2857 O_BomaMG14093_complete:A_BomaMG_comp24703_c0_seq1
635bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
2858 O_BomaMG14096_complete:A_BomaMG_comp24704_c0_seq1
464bp
GO:0002943 P tRNA dihydrouridine synthesis
GO:0003824 F catalytic activity
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016491 F oxidoreductase activity
GO:0017150 F tRNA dihydrouridine synthase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
2859 O_BomaMG14098_3prime_partial:A_BomaMG_comp24704_c0_seq2
362bp
GO:0002943 P tRNA dihydrouridine synthesis
GO:0003824 F catalytic activity
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016491 F oxidoreductase activity
GO:0017150 F tRNA dihydrouridine synthase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
2860 O_BomaMG14099_complete:A_BomaMG_comp24704_c0_seq3
400bp
GO:0002943 P tRNA dihydrouridine synthesis
GO:0003824 F catalytic activity
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016491 F oxidoreductase activity
GO:0017150 F tRNA dihydrouridine synthase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
2861 O_BomaMG1409_5prime_partial:A_BomaMG_comp12353_c0_seq1
179bp
putative_cuticle_protein_CPH45_precursor_[Bombyx_mori]
2862 O_BomaMG14101_3prime_partial:A_BomaMG_comp24704_c0_seq4
426bp
GO:0002943 P tRNA dihydrouridine synthesis
GO:0003824 F catalytic activity
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016491 F oxidoreductase activity
GO:0017150 F tRNA dihydrouridine synthase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
2863 O_BomaMG14102_3prime_partial:A_BomaMG_comp24705_c0_seq1
307bp
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006379 P mRNA cleavage
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0016070 P RNA metabolic process
GO:0031123 P RNA 3'-end processing
GO:1903220 P positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity
2864 O_BomaMG14104_internal:A_BomaMG_comp24706_c0_seq1
699bp
2865 O_BomaMG14107_3prime_partial:A_BomaMG_comp24706_c0_seq2
824bp
2866 O_BomaMG14111_3prime_partial:A_BomaMG_comp24706_c0_seq3
836bp
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060013 P righting reflex
GO:0098582 P innate vocalization behavior
GO:2000620 P positive regulation of histone H4-K16 acetylation
2867 O_BomaMG14116_complete:A_BomaMG_comp24707_c2_seq1
454bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2868 O_BomaMG14117_complete:A_BomaMG_comp24708_c0_seq2
176bp
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
2869 O_BomaMG14118_5prime_partial:A_BomaMG_comp24708_c0_seq3
529bp
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
2870 O_BomaMG1411_5prime_partial:A_BomaMG_comp12354_c0_seq1
347bp
PREDICTED:_lipase-1_isoform_X1_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0004806 F triglyceride lipase activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006629 P lipid metabolic process
GO:0009395 P phospholipid catabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019376 P galactolipid catabolic process
GO:0046872 F metal ion binding
GO:0047372 F acylglycerol lipase activity
GO:0047714 F galactolipase activity
GO:0052689 F carboxylic ester hydrolase activity
2871 O_BomaMG14121_complete:A_BomaMG_comp24709_c1_seq1
257bp
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030029 P actin filament-based process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045010 P actin nucleation
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
2872 O_BomaMG14122_5prime_partial:A_BomaMG_comp24709_c1_seq2
538bp
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030029 P actin filament-based process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045010 P actin nucleation
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
2873 O_BomaMG14124_internal:A_BomaMG_comp24711_c0_seq1
432bp
GO:0005576 C extracellular region
2874 O_BomaMG14126_internal:A_BomaMG_comp24711_c0_seq2
422bp
GO:0005576 C extracellular region
2875 O_BomaMG14128_complete:A_BomaMG_comp24712_c0_seq1
866bp
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
2876 O_BomaMG14129_complete:A_BomaMG_comp24714_c0_seq1
783bp
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
2877 O_BomaMG1412_complete:A_BomaMG_comp12354_c0_seq1
112bp
hypothetical_protein_[Frigoribacterium_sp._Leaf186]
2878 O_BomaMG14130_complete:A_BomaMG_comp24714_c1_seq1
202bp
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
2879 O_BomaMG14132_internal:A_BomaMG_comp24715_c0_seq1
571bp
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005737 C cytoplasm
GO:0008021 C synaptic vesicle
2880 O_BomaMG14134_complete:A_BomaMG_comp24716_c0_seq1
354bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004691 F cAMP-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005952 C cAMP-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007228 P positive regulation of hh target transcription factor activity
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007448 P anterior/posterior pattern specification, imaginal disc
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007611 P learning or memory
GO:0007612 P learning
GO:0007613 P memory
GO:0007615 P anesthesia-resistant memory
GO:0007622 P rhythmic behavior
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008355 P olfactory learning
GO:0008359 P regulation of bicoid mRNA localization
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019933 P cAMP-mediated signaling
GO:0030425 C dendrite
GO:0040040 P thermosensory behavior
GO:0042981 P regulation of apoptotic process
GO:0044297 C cell body
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0050804 P modulation of chemical synaptic transmission
previous next from show/16228

- SilkBase 1999-2023 -