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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2281 O_BomaMG13258_3prime_partial:A_BomaMG_comp24474_c0_seq3
315bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0048812 P neuron projection morphogenesis
2282 O_BomaMG13259_complete:A_BomaMG_comp24474_c0_seq4
115bp
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
2283 O_BomaMG1325_5prime_partial:A_BomaMG_comp12258_c0_seq1
157bp
PREDICTED:_protein_CutA_homolog_[Bombyx_mori]
GO:0010038 P response to metal ion
2284 O_BomaMG13260_3prime_partial:A_BomaMG_comp24475_c0_seq1
500bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
2285 O_BomaMG13262_complete:A_BomaMG_comp24476_c1_seq1
640bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
2286 O_BomaMG13265_complete:A_BomaMG_comp24476_c1_seq1
111bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
2287 O_BomaMG13267_complete:A_BomaMG_comp24476_c1_seq2
111bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
2288 O_BomaMG13268_complete:A_BomaMG_comp24477_c0_seq1
339bp
2289 O_BomaMG13269_3prime_partial:A_BomaMG_comp24477_c0_seq2
488bp
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0031396 P regulation of protein ubiquitination
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
2290 O_BomaMG1326_internal:A_BomaMG_comp12261_c0_seq1
223bp
PREDICTED:_myotubularin-related_protein_3_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046872 F metal ion binding
2291 O_BomaMG13270_complete:A_BomaMG_comp24477_c0_seq3
607bp
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0031396 P regulation of protein ubiquitination
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
2292 O_BomaMG13271_complete:A_BomaMG_comp24478_c0_seq1
131bp
2293 O_BomaMG13272_complete:A_BomaMG_comp24478_c0_seq2
156bp
2294 O_BomaMG13274_5prime_partial:A_BomaMG_comp24479_c0_seq1
118bp
GO:0000839 C Hrd1p ubiquitin ligase ERAD-L complex
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0043130 F ubiquitin binding
GO:0050790 P regulation of catalytic activity
GO:0070062 C extracellular exosome
GO:0097027 F ubiquitin-protein transferase activator activity
2295 O_BomaMG13275_complete:A_BomaMG_comp24480_c0_seq1
344bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2296 O_BomaMG13277_complete:A_BomaMG_comp24480_c0_seq2
247bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2297 O_BomaMG13278_complete:A_BomaMG_comp24480_c0_seq2
128bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2298 O_BomaMG13279_complete:A_BomaMG_comp24480_c0_seq3
344bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2299 O_BomaMG1327_3prime_partial:A_BomaMG_comp12269_c0_seq1
277bp
PREDICTED:_LOW_QUALITY_PROTEIN:_dihydrolipoyllysine-residue_acetyltransferase_component_of_pyruvate_dehydrogenase_complex,_mitochondrial_[Bombyx_mori]
GO:0004742 F dihydrolipoyllysine-residue acetyltransferase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006090 P pyruvate metabolic process
GO:0006096 P glycolytic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0045254 C pyruvate dehydrogenase complex
2300 O_BomaMG13281_complete:A_BomaMG_comp24480_c0_seq4
247bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2301 O_BomaMG13282_complete:A_BomaMG_comp24480_c0_seq4
128bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2302 O_BomaMG13285_complete:A_BomaMG_comp24482_c0_seq1
486bp
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006895 P Golgi to endosome transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030133 C transport vesicle
GO:0030140 C trans-Golgi network transport vesicle
GO:0032588 C trans-Golgi network membrane
2303 O_BomaMG13286_complete:A_BomaMG_comp24483_c0_seq1
405bp
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
2304 O_BomaMG13287_3prime_partial:A_BomaMG_comp24483_c0_seq2
431bp
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
2305 O_BomaMG13288_complete:A_BomaMG_comp24485_c0_seq1
832bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0070062 C extracellular exosome
2306 O_BomaMG1328_complete:A_BomaMG_comp12270_c0_seq1
162bp
PREDICTED:_protein_charybde-like_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0008258 P head involution
GO:0009968 P negative regulation of signal transduction
GO:0032006 P regulation of TOR signaling
2307 O_BomaMG13292_complete:A_BomaMG_comp24485_c0_seq2
832bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0070062 C extracellular exosome
2308 O_BomaMG13296_5prime_partial:A_BomaMG_comp24485_c0_seq3
154bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0009880 P embryonic pattern specification
GO:0009949 P polarity specification of anterior/posterior axis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030010 P establishment of cell polarity
GO:0032035 F myosin II tail binding
GO:0040025 P vulval development
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0046872 F metal ion binding
GO:0055059 P asymmetric neuroblast division
GO:0071944 C cell periphery
2309 O_BomaMG13297_complete:A_BomaMG_comp24485_c0_seq4
954bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0070062 C extracellular exosome
2310 O_BomaMG13302_complete:A_BomaMG_comp24485_c0_seq5
954bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0070062 C extracellular exosome
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