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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2041 O_BomaMG12917_complete:A_BomaMG_comp24347_c0_seq1
216bp
GO:0003674 F molecular_function
GO:0005875 C microtubule associated complex
GO:0008150 P biological_process
GO:0012505 C endomembrane system
2042 O_BomaMG12919_internal:A_BomaMG_comp24348_c1_seq1
766bp
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0008360 P regulation of cell shape
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0021551 P central nervous system morphogenesis
GO:0030239 P myofibril assembly
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035099 P hemocyte migration
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042383 C sarcolemma
GO:0045185 P maintenance of protein location
GO:0045214 P sarcomere organization
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
GO:0050896 P response to stimulus
GO:0051492 P regulation of stress fiber assembly
GO:1990430 F extracellular matrix protein binding
2043 O_BomaMG1291_5prime_partial:A_BomaMG_comp12204_c0_seq1
314bp
PREDICTED:_uncharacterized_protein_LOC101737485_isoform_X2_[Bombyx_mori]
2044 O_BomaMG12922_internal:A_BomaMG_comp24354_c0_seq1
139bp
2045 O_BomaMG12923_5prime_partial:A_BomaMG_comp24354_c1_seq1
421bp
2046 O_BomaMG12924_complete:A_BomaMG_comp24354_c2_seq1
420bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005796 C Golgi lumen
GO:0006810 P transport
GO:0007030 P Golgi organization
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0019899 F enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0043001 P Golgi to plasma membrane protein transport
2047 O_BomaMG12925_3prime_partial:A_BomaMG_comp24354_c3_seq1
513bp
2048 O_BomaMG12926_3prime_partial:A_BomaMG_comp24355_c0_seq1
635bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0007405 P neuroblast proliferation
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0048471 C perinuclear region of cytoplasm
GO:0097431 C mitotic spindle pole
GO:1990023 C mitotic spindle midzone
2049 O_BomaMG12929_3prime_partial:A_BomaMG_comp24355_c0_seq2
433bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0007405 P neuroblast proliferation
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0048471 C perinuclear region of cytoplasm
GO:0097431 C mitotic spindle pole
GO:1990023 C mitotic spindle midzone
2050 O_BomaMG1292_complete:A_BomaMG_comp12205_c0_seq1
220bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_7_[Amyelois_transitella]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
2051 O_BomaMG12932_3prime_partial:A_BomaMG_comp24355_c0_seq3
658bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007052 P mitotic spindle organization
GO:0007405 P neuroblast proliferation
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015631 F tubulin binding
GO:0048471 C perinuclear region of cytoplasm
GO:0097431 C mitotic spindle pole
GO:1990023 C mitotic spindle midzone
2052 O_BomaMG12935_5prime_partial:A_BomaMG_comp24356_c0_seq1
156bp
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001725 C stress fiber
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0003151 P outflow tract morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0007050 P regulation of cell cycle
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007569 P cell aging
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0010667 P negative regulation of cardiac muscle cell apoptotic process
GO:0010761 P fibroblast migration
GO:0014044 P Schwann cell development
GO:0014912 P negative regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0021675 P nerve development
GO:0022011 P myelination in peripheral nervous system
GO:0030017 C sarcomere
GO:0030027 C lamellipodium
GO:0030030 P cell projection organization
GO:0030054 C cell junction
GO:0030335 P positive regulation of cell migration
GO:0030424 C axon
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031012 C extracellular matrix
GO:0032288 P myelin assembly
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034329 P cell junction assembly
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043034 C costamere
GO:0043066 P negative regulation of apoptotic process
GO:0043195 C terminal bouton
GO:0043198 C dendritic shaft
GO:0043206 P supramolecular fiber organization
GO:0043234 C protein-containing complex
GO:0043406 P positive regulation of MAP kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0043491 P protein kinase B signaling
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045663 P positive regulation of myoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045773 P positive regulation of axon extension
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048812 P neuron projection morphogenesis
GO:0050772 P positive regulation of axonogenesis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0051291 P protein heterooligomerization
GO:0051897 P positive regulation of protein kinase B signaling
GO:0070527 P platelet aggregation
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:2000178 P negative regulation of neural precursor cell proliferation
2053 O_BomaMG12937_complete:A_BomaMG_comp24357_c1_seq1
493bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0046872 F metal ion binding
2054 O_BomaMG12938_3prime_partial:A_BomaMG_comp24360_c0_seq1
780bp
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005829 C cytosol
2055 O_BomaMG12939_3prime_partial:A_BomaMG_comp24360_c0_seq2
780bp
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005829 C cytosol
2056 O_BomaMG1293_3prime_partial:A_BomaMG_comp12209_c0_seq1
474bp
PREDICTED:_formin-binding_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0031410 C cytoplasmic vesicle
2057 O_BomaMG12940_3prime_partial:A_BomaMG_comp24360_c0_seq4
847bp
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005829 C cytosol
2058 O_BomaMG12941_3prime_partial:A_BomaMG_comp24360_c0_seq5
847bp
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005829 C cytosol
2059 O_BomaMG12942_complete:A_BomaMG_comp24361_c0_seq1
158bp
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009055 F electron transfer activity
GO:0042446 P hormone biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
2060 O_BomaMG12944_complete:A_BomaMG_comp24362_c1_seq1
316bp
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0042803 F protein homodimerization activity
GO:0043186 C P granule
GO:0051321 P meiotic cell cycle
GO:1990923 C PET complex
2061 O_BomaMG12945_internal:A_BomaMG_comp24362_c2_seq1
141bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
2062 O_BomaMG12946_5prime_partial:A_BomaMG_comp24363_c0_seq1
1227bp
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
2063 O_BomaMG12949_5prime_partial:A_BomaMG_comp24364_c1_seq1
558bp
2064 O_BomaMG1294_5prime_partial:A_BomaMG_comp12211_c0_seq1
554bp
PREDICTED:_kinesin-like_protein_a_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0000775 C chromosome, centromeric region
GO:0000922 C spindle pole
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007019 P microtubule depolymerization
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007057 P spindle assembly involved in female meiosis I
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007079 P mitotic chromosome movement towards spindle pole
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008574 F plus-end-directed microtubule motor activity
GO:0051296 P establishment of meiotic spindle orientation
GO:0051298 P centrosome duplication
GO:0051301 P cell division
GO:0055028 C cortical microtubule
GO:0061673 C mitotic spindle astral microtubule
GO:0072687 C meiotic spindle
GO:0090307 P mitotic spindle assembly
GO:0090619 C meiotic spindle pole
GO:0097431 C mitotic spindle pole
2065 O_BomaMG12951_5prime_partial:A_BomaMG_comp24364_c1_seq2
504bp
2066 O_BomaMG12953_complete:A_BomaMG_comp24366_c0_seq1
218bp
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016358 P dendrite development
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045212 P obsolete neurotransmitter receptor biosynthetic process
2067 O_BomaMG12954_complete:A_BomaMG_comp24367_c0_seq1
192bp
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
2068 O_BomaMG12956_complete:A_BomaMG_comp24367_c0_seq2
192bp
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
2069 O_BomaMG12958_complete:A_BomaMG_comp24368_c1_seq1
162bp
GO:0000164 C protein phosphatase type 1 complex
GO:0004864 F protein phosphatase inhibitor activity
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0009966 P regulation of signal transduction
GO:0043086 P negative regulation of catalytic activity
GO:0043666 P regulation of phosphoprotein phosphatase activity
2070 O_BomaMG12959_3prime_partial:A_BomaMG_comp24369_c1_seq2
402bp
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
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