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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1891 O_BomaMG12725_5prime_partial:A_BomaMG_comp24255_c0_seq3
104bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0007601 P visual perception
GO:0050896 P response to stimulus
1892 O_BomaMG12726_3prime_partial:A_BomaMG_comp24256_c0_seq2
390bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0046872 F metal ion binding
GO:0070578 C RISC-loading complex
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1893 O_BomaMG12728_internal:A_BomaMG_comp24256_c1_seq1
394bp
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1894 O_BomaMG1272_internal:A_BomaMG_comp12168_c0_seq2
622bp
PREDICTED:_ATP-binding_cassette_sub-family_F_member_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006413 P translational initiation
GO:0008494 F translation activator activity
GO:0016887 F ATP hydrolysis activity
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
GO:0043022 F ribosome binding
GO:0045727 P positive regulation of translation
1895 O_BomaMG12730_5prime_partial:A_BomaMG_comp24257_c0_seq1
206bp
1896 O_BomaMG12731_complete:A_BomaMG_comp24258_c0_seq1
1126bp
GO:0000902 P cell morphogenesis
GO:0001555 P oocyte growth
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007010 P cytoskeleton organization
GO:0007409 P axonogenesis
GO:0007417 P central nervous system development
GO:0007520 P myoblast fusion
GO:0007528 P neuromuscular junction development
GO:0008360 P regulation of cell shape
GO:0008407 P chaeta morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030031 P cell projection assembly
GO:0030036 P actin cytoskeleton organization
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0033627 P cell adhesion mediated by integrin
1897 O_BomaMG12732_complete:A_BomaMG_comp24259_c0_seq1
387bp
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:1990077 C primosome complex
1898 O_BomaMG12733_complete:A_BomaMG_comp24259_c0_seq3
374bp
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:1990077 C primosome complex
1899 O_BomaMG12734_3prime_partial:A_BomaMG_comp24260_c0_seq1
813bp
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0004528 F phosphodiesterase I activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0017108 F 5'-flap endonuclease activity
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0036297 P interstrand cross-link repair
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0070336 F flap-structured DNA binding
1900 O_BomaMG12735_internal:A_BomaMG_comp24261_c0_seq1
318bp
GO:0000165 P MAPK cascade
GO:0002046 F opsin binding
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007030 P Golgi organization
GO:0007041 P lysosomal transport
GO:0007411 P axon guidance
GO:0008022 F protein C-terminus binding
GO:0008091 C spectrin
GO:0016020 C membrane
GO:0019894 F kinesin binding
GO:0030036 P actin cytoskeleton organization
GO:0030507 F spectrin binding
GO:0030863 C cortical cytoskeleton
GO:0032029 F myosin tail binding
GO:0032391 C photoreceptor connecting cilium
GO:0034452 F dynactin binding
GO:0043547 P positive regulation of GTPase activity
GO:0043621 F protein self-association
GO:0045179 C apical cortex
GO:0045505 F dynein intermediate chain binding
GO:0046982 F protein heterodimerization activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:0097381 C photoreceptor disc membrane
1901 O_BomaMG12737_complete:A_BomaMG_comp24262_c3_seq2
226bp
1902 O_BomaMG12738_complete:A_BomaMG_comp24264_c0_seq1
222bp
GO:0002230 P positive regulation of defense response to virus by host
GO:0005123 F death receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0007165 P signal transduction
GO:0007291 P sperm individualization
GO:0045089 P positive regulation of innate immune response
GO:0050700 F CARD domain binding
GO:0050829 P defense response to Gram-negative bacterium
GO:0061057 P peptidoglycan recognition protein signaling pathway
1903 O_BomaMG12739_internal:A_BomaMG_comp24265_c0_seq1
211bp
1904 O_BomaMG12741_3prime_partial:A_BomaMG_comp24266_c0_seq2
217bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021554 P optic nerve development
1905 O_BomaMG12742_3prime_partial:A_BomaMG_comp24268_c0_seq1
268bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
1906 O_BomaMG12743_5prime_partial:A_BomaMG_comp24269_c0_seq1
444bp
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0030141 C secretory granule
GO:0033593 C BRCA2-MAGE-D1 complex
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
1907 O_BomaMG12745_5prime_partial:A_BomaMG_comp24269_c0_seq3
444bp
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0030141 C secretory granule
GO:0033593 C BRCA2-MAGE-D1 complex
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
1908 O_BomaMG12747_complete:A_BomaMG_comp24269_c0_seq3
109bp
1909 O_BomaMG12748_complete:A_BomaMG_comp24270_c0_seq1
515bp
GO:0001889 P liver development
GO:0001972 F retinoic acid binding
GO:0004857 F enzyme inhibitor activity
GO:0005496 F steroid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006953 P acute-phase response
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0009813 P flavonoid biosynthetic process
GO:0010033 P response to organic substance
GO:0014070 P response to organic cyclic compound
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0019899 F enzyme binding
GO:0031100 P animal organ regeneration
GO:0032496 P response to lipopolysaccharide
GO:0032870 P cellular response to hormone stimulus
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0042493 P response to xenobiotic stimulus
GO:0042594 P response to starvation
GO:0042803 F protein homodimerization activity
GO:0043086 P negative regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045471 P response to ethanol
GO:0046982 F protein heterodimerization activity
GO:0048545 P response to steroid hormone
GO:0051384 P response to glucocorticoid
GO:0051552 P flavone metabolic process
GO:0052695 P cellular glucuronidation
GO:0052696 P flavonoid glucuronidation
GO:0052697 P xenobiotic glucuronidation
GO:0070069 C cytochrome complex
GO:0070980 P biphenyl catabolic process
GO:0071361 P cellular response to ethanol
GO:0071385 P cellular response to glucocorticoid stimulus
GO:2001030 P negative regulation of cellular glucuronidation
1910 O_BomaMG1274_complete:A_BomaMG_comp12169_c0_seq1
337bp
PREDICTED:_UPF0553_protein_C9orf64_homolog_[Papilio_machaon]
1911 O_BomaMG12750_complete:A_BomaMG_comp24270_c0_seq3
411bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
1912 O_BomaMG12751_complete:A_BomaMG_comp24270_c0_seq5
515bp
GO:0001889 P liver development
GO:0001972 F retinoic acid binding
GO:0004857 F enzyme inhibitor activity
GO:0005496 F steroid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006953 P acute-phase response
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0009813 P flavonoid biosynthetic process
GO:0010033 P response to organic substance
GO:0014070 P response to organic cyclic compound
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0019899 F enzyme binding
GO:0031100 P animal organ regeneration
GO:0032496 P response to lipopolysaccharide
GO:0032870 P cellular response to hormone stimulus
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0042493 P response to xenobiotic stimulus
GO:0042594 P response to starvation
GO:0042803 F protein homodimerization activity
GO:0043086 P negative regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045471 P response to ethanol
GO:0046982 F protein heterodimerization activity
GO:0048545 P response to steroid hormone
GO:0051384 P response to glucocorticoid
GO:0051552 P flavone metabolic process
GO:0052695 P cellular glucuronidation
GO:0052696 P flavonoid glucuronidation
GO:0052697 P xenobiotic glucuronidation
GO:0070069 C cytochrome complex
GO:0070980 P biphenyl catabolic process
GO:0071361 P cellular response to ethanol
GO:0071385 P cellular response to glucocorticoid stimulus
GO:2001030 P negative regulation of cellular glucuronidation
1913 O_BomaMG12752_5prime_partial:A_BomaMG_comp24270_c0_seq6
486bp
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
1914 O_BomaMG12753_internal:A_BomaMG_comp24270_c1_seq1
144bp
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
1915 O_BomaMG12754_5prime_partial:A_BomaMG_comp24271_c0_seq1
137bp
1916 O_BomaMG12755_5prime_partial:A_BomaMG_comp24271_c0_seq2
153bp
1917 O_BomaMG12756_complete:A_BomaMG_comp24272_c0_seq1
1029bp
1918 O_BomaMG12757_complete:A_BomaMG_comp24272_c0_seq3
1284bp
1919 O_BomaMG12758_complete:A_BomaMG_comp24272_c0_seq4
1494bp
1920 O_BomaMG12759_complete:A_BomaMG_comp24272_c0_seq5
819bp
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