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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1711 O_BomaMG12455_internal:A_BomaMG_comp24160_c1_seq3
341bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1712 O_BomaMG12458_internal:A_BomaMG_comp24160_c1_seq4
371bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1713 O_BomaMG1245_complete:A_BomaMG_comp12131_c0_seq1
309bp
PREDICTED:_elongation_of_very_long_chain_fatty_acids_protein_6_[Papilio_xuthus]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0019367 P fatty acid elongation, saturated fatty acid
GO:0042759 P long-chain fatty acid biosynthetic process
1714 O_BomaMG12461_complete:A_BomaMG_comp24161_c0_seq2
371bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1715 O_BomaMG12463_complete:A_BomaMG_comp24161_c0_seq3
393bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1716 O_BomaMG12465_complete:A_BomaMG_comp24161_c0_seq4
427bp
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1717 O_BomaMG12468_complete:A_BomaMG_comp24161_c0_seq5
427bp
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1718 O_BomaMG1246_internal:A_BomaMG_comp12132_c0_seq1
115bp
PREDICTED:_interferon-related_developmental_regulator_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0014706 P striated muscle tissue development
GO:0030154 P cell differentiation
GO:0030517 P negative regulation of axon extension
GO:0042692 P muscle cell differentiation
GO:0043403 P skeletal muscle tissue regeneration
GO:0048671 P negative regulation of collateral sprouting
1719 O_BomaMG12471_complete:A_BomaMG_comp24161_c0_seq6
363bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1720 O_BomaMG12473_complete:A_BomaMG_comp24161_c0_seq8
401bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1721 O_BomaMG12475_complete:A_BomaMG_comp24161_c0_seq9
363bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1722 O_BomaMG12477_complete:A_BomaMG_comp24161_c0_seq10
314bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1723 O_BomaMG12478_complete:A_BomaMG_comp24161_c0_seq11
363bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1724 O_BomaMG1247_complete:A_BomaMG_comp12135_c0_seq1
302bp
PREDICTED:_serine_hydrolase-like_protein_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
1725 O_BomaMG12480_complete:A_BomaMG_comp24161_c0_seq12
344bp
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1726 O_BomaMG12481_complete:A_BomaMG_comp24161_c0_seq13
314bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1727 O_BomaMG12482_complete:A_BomaMG_comp24161_c0_seq14
457bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1728 O_BomaMG12485_complete:A_BomaMG_comp24161_c0_seq15
457bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1729 O_BomaMG12488_complete:A_BomaMG_comp24161_c0_seq16
344bp
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1730 O_BomaMG12489_complete:A_BomaMG_comp24161_c0_seq17
401bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1731 O_BomaMG1248_internal:A_BomaMG_comp12139_c0_seq1
199bp
PREDICTED:_golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
1732 O_BomaMG12491_complete:A_BomaMG_comp24161_c0_seq18
393bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1733 O_BomaMG12493_complete:A_BomaMG_comp24161_c0_seq19
371bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1734 O_BomaMG12495_complete:A_BomaMG_comp24161_c0_seq20
427bp
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1735 O_BomaMG12498_complete:A_BomaMG_comp24161_c0_seq22
314bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1736 O_BomaMG12499_complete:A_BomaMG_comp24161_c0_seq23
371bp
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1737 O_BomaMG1249_complete:A_BomaMG_comp12140_c0_seq1
111bp
PREDICTED:_protein_FAM32A-like_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
1738 O_BomaMG12501_complete:A_BomaMG_comp24162_c0_seq1
184bp
1739 O_BomaMG12502_3prime_partial:A_BomaMG_comp24163_c0_seq1
522bp
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
1740 O_BomaMG12503_complete:A_BomaMG_comp24166_c0_seq1
495bp
GO:0000790 C chromatin
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0010452 P histone H3-K36 methylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0018023 P peptidyl-lysine trimethylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018026 P peptidyl-lysine monomethylation
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
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