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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1591 O_BomaMG12275_complete:A_BomaMG_comp24091_c0_seq2
270bp
1592 O_BomaMG12276_complete:A_BomaMG_comp24091_c0_seq2
114bp
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0048487 F beta-tubulin binding
1593 O_BomaMG12277_complete:A_BomaMG_comp24091_c0_seq3
411bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005689 C U12-type spliceosomal complex
GO:0006915 P apoptotic process
GO:0051384 P response to glucocorticoid
GO:0070234 P positive regulation of T cell apoptotic process
GO:2001235 P positive regulation of apoptotic signaling pathway
1594 O_BomaMG12278_complete:A_BomaMG_comp24091_c0_seq3
114bp
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0048487 F beta-tubulin binding
1595 O_BomaMG1227_3prime_partial:A_BomaMG_comp12110_c0_seq1
251bp
DnaJ-26,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006417 P regulation of translation
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031090 C organelle membrane
GO:0031965 C nuclear membrane
GO:0043022 F ribosome binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0050708 P regulation of protein secretion
GO:0051087 F chaperone binding
1596 O_BomaMG12280_5prime_partial:A_BomaMG_comp24092_c0_seq1
200bp
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
1597 O_BomaMG12282_complete:A_BomaMG_comp24093_c0_seq1
1227bp
1598 O_BomaMG12286_complete:A_BomaMG_comp24093_c0_seq2
1227bp
1599 O_BomaMG1228_internal:A_BomaMG_comp12113_c0_seq1
451bp
PREDICTED:_myosin-IA_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0042623 F ATP hydrolysis activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
1600 O_BomaMG12291_3prime_partial:A_BomaMG_comp24094_c0_seq1
476bp
GO:0001736 P establishment of planar polarity
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0030042 P actin filament depolymerization
GO:0030833 P regulation of actin filament polymerization
GO:0030834 P regulation of actin filament depolymerization
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0035317 P imaginal disc-derived wing hair organization
GO:0045214 P sarcomere organization
1601 O_BomaMG12295_5prime_partial:A_BomaMG_comp24095_c0_seq1
283bp
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005078 F MAP-kinase scaffold activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019722 P calcium-mediated signaling
GO:0031434 F mitogen-activated protein kinase kinase binding
GO:0035556 P intracellular signal transduction
GO:0043410 P positive regulation of MAPK cascade
GO:0046872 F metal ion binding
1602 O_BomaMG12296_3prime_partial:A_BomaMG_comp24096_c0_seq1
358bp
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
1603 O_BomaMG12297_complete:A_BomaMG_comp24096_c0_seq2
332bp
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
1604 O_BomaMG12299_3prime_partial:A_BomaMG_comp24096_c0_seq3
358bp
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
1605 O_BomaMG1229_5prime_partial:A_BomaMG_comp12113_c0_seq1
372bp
hypothetical_protein_THAOC_06351_[Thalassiosira_oceanica]
1606 O_BomaMG12301_complete:A_BomaMG_comp24096_c0_seq4
332bp
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
1607 O_BomaMG12302_complete:A_BomaMG_comp24097_c0_seq1
216bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0032259 P methylation
GO:0070062 C extracellular exosome
1608 O_BomaMG12303_complete:A_BomaMG_comp24097_c0_seq2
216bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018022 P peptidyl-lysine methylation
GO:0032259 P methylation
GO:0070062 C extracellular exosome
1609 O_BomaMG12304_complete:A_BomaMG_comp24098_c1_seq1
420bp
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
1610 O_BomaMG12305_5prime_partial:A_BomaMG_comp24098_c1_seq2
471bp
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
1611 O_BomaMG12306_complete:A_BomaMG_comp24099_c0_seq1
1044bp
GO:0000166 F nucleotide binding
GO:0000792 C heterochromatin
GO:0004839 F ubiquitin activating enzyme activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0006464 P cellular protein modification process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0010008 C endosome membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019941 P modification-dependent protein catabolic process
GO:0030057 C desmosome
GO:0030867 C rough endoplasmic reticulum membrane
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
1612 O_BomaMG12308_3prime_partial:A_BomaMG_comp24100_c0_seq1
1419bp
1613 O_BomaMG12314_5prime_partial:A_BomaMG_comp24102_c0_seq1
1023bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1614 O_BomaMG12315_5prime_partial:A_BomaMG_comp24103_c0_seq1
104bp
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007623 P circadian rhythm
GO:0009267 P cellular response to starvation
GO:0030282 P bone mineralization
GO:0035019 P somatic stem cell population maintenance
GO:0042752 P regulation of circadian rhythm
GO:0045672 P positive regulation of osteoclast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:1901653 P cellular response to peptide
1615 O_BomaMG12316_5prime_partial:A_BomaMG_comp24103_c0_seq2
134bp
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007623 P circadian rhythm
GO:0009267 P cellular response to starvation
GO:0030282 P bone mineralization
GO:0035019 P somatic stem cell population maintenance
GO:0042752 P regulation of circadian rhythm
GO:0045672 P positive regulation of osteoclast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:1901653 P cellular response to peptide
1616 O_BomaMG12317_complete:A_BomaMG_comp24104_c0_seq1
326bp
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008652 P cellular amino acid biosynthetic process
GO:0008898 F S-adenosylmethionine-homocysteine S-methyltransferase activity
GO:0009086 P methionine biosynthetic process
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0047150 F betaine-homocysteine S-methyltransferase activity
1617 O_BomaMG12318_complete:A_BomaMG_comp24107_c0_seq1
213bp
GO:0004871 F obsolete signal transducer activity
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
1618 O_BomaMG12319_3prime_partial:A_BomaMG_comp24110_c0_seq1
357bp
GO:0001731 P formation of translation preinitiation complex
GO:0002192 P IRES-dependent translational initiation of linear mRNA
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0022627 C cytosolic small ribosomal subunit
GO:0032790 P ribosome disassembly
1619 O_BomaMG1231_complete:A_BomaMG_comp12116_c0_seq1
268bp
PREDICTED:_NFU1_iron-sulfur_cluster_scaffold_homolog,_mitochondrial-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005506 F iron ion binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0016226 P iron-sulfur cluster assembly
GO:0051536 F iron-sulfur cluster binding
1620 O_BomaMG12321_complete:A_BomaMG_comp24110_c0_seq2
108bp
GO:0001731 P formation of translation preinitiation complex
GO:0002192 P IRES-dependent translational initiation of linear mRNA
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0022627 C cytosolic small ribosomal subunit
GO:0032790 P ribosome disassembly
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