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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1471 O_BomaMG12117_3prime_partial:A_BomaMG_comp24029_c1_seq3
798bp
1472 O_BomaMG1211_complete:A_BomaMG_comp12088_c0_seq1
397bp
PREDICTED:_mitochondrial_inner_membrane_protein_OXA1L_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006461 P protein-containing complex assembly
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0032780 P negative regulation of ATP-dependent activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0033615 P mitochondrial proton-transporting ATP synthase complex assembly
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0051205 P protein insertion into membrane
GO:0051262 P protein tetramerization
GO:0051354 P negative regulation of oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097031 P obsolete mitochondrial respiratory chain complex I biogenesis
GO:0097177 F mitochondrial ribosome binding
1473 O_BomaMG12120_3prime_partial:A_BomaMG_comp24029_c1_seq4
220bp
1474 O_BomaMG12121_internal:A_BomaMG_comp24029_c1_seq5
314bp
1475 O_BomaMG12122_3prime_partial:A_BomaMG_comp24030_c0_seq1
432bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0009019 F tRNA (guanine-N1-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0052906 F tRNA (guanine(37)-N(1))-methyltransferase activity
1476 O_BomaMG12123_complete:A_BomaMG_comp24030_c0_seq2
260bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003919 F FMN adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006747 P FAD biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1477 O_BomaMG12124_complete:A_BomaMG_comp24031_c1_seq1
452bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
1478 O_BomaMG12125_3prime_partial:A_BomaMG_comp24032_c0_seq1
584bp
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008277 P regulation of G protein-coupled receptor signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
1479 O_BomaMG12126_complete:A_BomaMG_comp24033_c0_seq1
455bp
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006996 P organelle organization
GO:0016020 C membrane
1480 O_BomaMG12128_complete:A_BomaMG_comp24035_c0_seq1
611bp
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1481 O_BomaMG12129_3prime_partial:A_BomaMG_comp24036_c0_seq1
500bp
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1482 O_BomaMG1212_complete:A_BomaMG_comp12089_c0_seq1
193bp
PREDICTED:_28S_ribosomal_protein_S18a,_mitochondrial_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
1483 O_BomaMG12132_complete:A_BomaMG_comp24037_c0_seq1
235bp
GO:0003351 P epithelial cilium movement involved in extracellular fluid movement
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0007368 P determination of left/right symmetry
GO:0021591 P ventricular system development
GO:0021670 P lateral ventricle development
GO:0021678 P third ventricle development
GO:0030317 P flagellated sperm motility
GO:0060972 P left/right pattern formation
1484 O_BomaMG12133_complete:A_BomaMG_comp24037_c0_seq1
201bp
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042273 P ribosomal large subunit biogenesis
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
1485 O_BomaMG12134_internal:A_BomaMG_comp24038_c0_seq1
1759bp
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0010369 C chromocenter
1486 O_BomaMG12135_5prime_partial:A_BomaMG_comp24039_c1_seq2
256bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
1487 O_BomaMG12136_complete:A_BomaMG_comp24039_c1_seq3
114bp
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1488 O_BomaMG12137_complete:A_BomaMG_comp24039_c1_seq4
107bp
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1489 O_BomaMG12138_5prime_partial:A_BomaMG_comp24039_c1_seq5
249bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
1490 O_BomaMG1213_complete:A_BomaMG_comp12090_c0_seq1
105bp
PREDICTED:_uncharacterized_protein_LOC101742726_isoform_X1_[Bombyx_mori]
1491 O_BomaMG12140_complete:A_BomaMG_comp24041_c0_seq1
147bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0051028 P mRNA transport
GO:0070062 C extracellular exosome
1492 O_BomaMG12142_complete:A_BomaMG_comp24041_c0_seq2
147bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0051028 P mRNA transport
GO:0070062 C extracellular exosome
1493 O_BomaMG12146_complete:A_BomaMG_comp24042_c0_seq1
550bp
GO:0004672 F protein kinase activity
GO:0005739 C mitochondrion
GO:0006468 P protein phosphorylation
GO:0045333 P cellular respiration
1494 O_BomaMG12147_complete:A_BomaMG_comp24043_c0_seq1
107bp
GO:0000103 P sulfate assimilation
GO:0001666 P response to hypoxia
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006662 P glycerol ether metabolic process
GO:0006979 P response to oxidative stress
GO:0007584 P response to nutrient
GO:0008113 F peptide-methionine (S)-S-oxide reductase activity
GO:0009725 P response to hormone
GO:0009749 P response to glucose
GO:0014070 P response to organic cyclic compound
GO:0015035 F protein-disulfide reductase activity
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0032403 F protein-containing complex binding
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0034599 P cellular response to oxidative stress
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0048678 P response to axon injury
GO:0055114 P obsolete oxidation-reduction process
1495 O_BomaMG12148_complete:A_BomaMG_comp24043_c0_seq3
143bp
GO:0000103 P sulfate assimilation
GO:0001666 P response to hypoxia
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006662 P glycerol ether metabolic process
GO:0006979 P response to oxidative stress
GO:0007584 P response to nutrient
GO:0008113 F peptide-methionine (S)-S-oxide reductase activity
GO:0009725 P response to hormone
GO:0009749 P response to glucose
GO:0014070 P response to organic cyclic compound
GO:0015035 F protein-disulfide reductase activity
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0032403 F protein-containing complex binding
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0034599 P cellular response to oxidative stress
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0048678 P response to axon injury
GO:0055114 P obsolete oxidation-reduction process
1496 O_BomaMG1214_complete:A_BomaMG_comp12090_c0_seq2
110bp
PREDICTED:_uncharacterized_protein_LOC101742726_isoform_X1_[Bombyx_mori]
1497 O_BomaMG12151_complete:A_BomaMG_comp24045_c1_seq1
480bp
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1498 O_BomaMG12153_5prime_partial:A_BomaMG_comp24046_c0_seq2
407bp
GO:0001104 F transcription coregulator activity
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007399 P nervous system development
GO:0016592 C mediator complex
1499 O_BomaMG12154_complete:A_BomaMG_comp24047_c0_seq1
403bp
GO:0000166 F nucleotide binding
GO:0004756 F selenide, water dikinase activity
GO:0005524 F ATP binding
GO:0006541 P glutamine metabolic process
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007444 P imaginal disc development
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0010906 P regulation of glucose metabolic process
GO:0016260 P selenocysteine biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:2000378 P negative regulation of reactive oxygen species metabolic process
1500 O_BomaMG12155_internal:A_BomaMG_comp24048_c0_seq1
487bp
GO:0001105 F transcription coactivator activity
GO:0001701 P in utero embryonic development
GO:0001764 P neuron migration
GO:0001889 P liver development
GO:0003007 P heart morphogenesis
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0010467 P gene expression
GO:0010468 P regulation of gene expression
GO:0030036 P actin cytoskeleton organization
GO:0030154 P cell differentiation
GO:0030900 P forebrain development
GO:0031175 P neuron projection development
GO:0045844 P positive regulation of striated muscle tissue development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048514 P blood vessel morphogenesis
GO:0048568 P embryonic organ development
GO:0048738 P cardiac muscle tissue development
GO:0051145 P smooth muscle cell differentiation
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