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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1411 O_BomaMG12028_5prime_partial:A_BomaMG_comp23997_c0_seq1
101bp
1412 O_BomaMG1202_complete:A_BomaMG_comp12079_c0_seq1
225bp
stromal_cell-derived_factor_2_precursor_[Bombyx_mori]
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
1413 O_BomaMG12031_5prime_partial:A_BomaMG_comp23997_c0_seq2
103bp
1414 O_BomaMG12033_complete:A_BomaMG_comp23998_c3_seq1
162bp
1415 O_BomaMG12034_complete:A_BomaMG_comp23998_c3_seq2
275bp
GO:0000123 C histone acetyltransferase complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043968 P histone H2A acetylation
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043983 P histone H4-K12 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0044154 P histone H3-K14 acetylation
GO:0070776 C MOZ/MORF histone acetyltransferase complex
1416 O_BomaMG12035_5prime_partial:A_BomaMG_comp23998_c4_seq1
123bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030316 P osteoclast differentiation
GO:0043231 C intracellular membrane-bounded organelle
1417 O_BomaMG12038_5prime_partial:A_BomaMG_comp23998_c4_seq4
123bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030316 P osteoclast differentiation
GO:0043231 C intracellular membrane-bounded organelle
1418 O_BomaMG12039_3prime_partial:A_BomaMG_comp23999_c0_seq1
334bp
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001890 P placenta development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0010225 P response to UV-C
GO:0010468 P regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019100 P male germ-line sex determination
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0035556 P intracellular signal transduction
GO:0043507 P positive regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0048263 P determination of dorsal identity
GO:0048471 C perinuclear region of cytoplasm
GO:0051973 P positive regulation of telomerase activity
GO:0060718 P chorionic trophoblast cell differentiation
GO:1900745 P positive regulation of p38MAPK cascade
GO:1904355 P positive regulation of telomere capping
1419 O_BomaMG1203_complete:A_BomaMG_comp12080_c0_seq1
128bp
general_control_of_amino_acid_synthesis-like_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0007274 P neuromuscular synaptic transmission
GO:0008057 P eye pigment granule organization
GO:0008355 P olfactory learning
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0048489 P synaptic vesicle transport
GO:0050808 P synapse organization
1420 O_BomaMG12042_3prime_partial:A_BomaMG_comp23999_c0_seq2
831bp
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001890 P placenta development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0010225 P response to UV-C
GO:0010468 P regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019100 P male germ-line sex determination
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0035556 P intracellular signal transduction
GO:0043507 P positive regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0048263 P determination of dorsal identity
GO:0048471 C perinuclear region of cytoplasm
GO:0051973 P positive regulation of telomerase activity
GO:0060718 P chorionic trophoblast cell differentiation
GO:1900745 P positive regulation of p38MAPK cascade
GO:1904355 P positive regulation of telomere capping
1421 O_BomaMG12046_complete:A_BomaMG_comp24000_c0_seq1
414bp
GO:0004109 F coproporphyrinogen oxidase activity
GO:0005739 C mitochondrion
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0055114 P obsolete oxidation-reduction process
1422 O_BomaMG12047_complete:A_BomaMG_comp24000_c0_seq2
392bp
GO:0004109 F coproporphyrinogen oxidase activity
GO:0005739 C mitochondrion
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0055114 P obsolete oxidation-reduction process
1423 O_BomaMG12048_complete:A_BomaMG_comp24001_c0_seq1
799bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004748 F ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005524 F ATP binding
GO:0005971 C ribonucleoside-diphosphate reductase complex
GO:0006260 P DNA replication
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008152 P metabolic process
GO:0009263 P deoxyribonucleotide biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0042246 P tissue regeneration
GO:0055114 P obsolete oxidation-reduction process
1424 O_BomaMG12049_5prime_partial:A_BomaMG_comp24001_c0_seq2
642bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004748 F ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005524 F ATP binding
GO:0005971 C ribonucleoside-diphosphate reductase complex
GO:0006260 P DNA replication
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008152 P metabolic process
GO:0009263 P deoxyribonucleotide biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0042246 P tissue regeneration
GO:0055114 P obsolete oxidation-reduction process
1425 O_BomaMG1204_complete:A_BomaMG_comp12082_c0_seq1
386bp
PREDICTED:_farnesyl_diphosphate_synthase_3_isoform_X1_[Bombyx_mori]
GO:0004161 F dimethylallyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006695 P cholesterol biosynthetic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016126 P sterol biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
1426 O_BomaMG12050_complete:A_BomaMG_comp24001_c1_seq1
160bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0009790 P embryo development
1427 O_BomaMG12051_complete:A_BomaMG_comp24001_c1_seq2
267bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0009790 P embryo development
1428 O_BomaMG12052_complete:A_BomaMG_comp24002_c0_seq1
1450bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000778 C kinetochore
GO:0000940 C outer kinetochore
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0034501 P protein localization to kinetochore
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:0071459 P protein localization to chromosome, centromeric region
1429 O_BomaMG12054_complete:A_BomaMG_comp24002_c0_seq1
127bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000780 C condensed chromosome, centromeric region
GO:0000942 C outer kinetochore
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007063 P regulation of sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0071173 P spindle assembly checkpoint signaling
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
1430 O_BomaMG12056_complete:A_BomaMG_comp24002_c0_seq2
1596bp
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000942 C outer kinetochore
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007063 P regulation of sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0051983 P regulation of chromosome segregation
GO:0071173 P spindle assembly checkpoint signaling
1431 O_BomaMG12059_3prime_partial:A_BomaMG_comp24003_c0_seq1
575bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0016063 P rhodopsin biosynthetic process
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032428 F beta-N-acetylgalactosaminidase activity
1432 O_BomaMG12063_5prime_partial:A_BomaMG_comp24004_c0_seq1
270bp
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0005929 C cilium
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006996 P organelle organization
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008574 F plus-end-directed microtubule motor activity
GO:0015630 C microtubule cytoskeleton
GO:0016939 C kinesin II complex
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0022008 P neurogenesis
GO:0030030 P cell projection organization
GO:0030507 F spectrin binding
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:0072372 C cilium
GO:0072383 P plus-end-directed vesicle transport along microtubule
GO:0097542 C ciliary tip
1433 O_BomaMG12065_3prime_partial:A_BomaMG_comp24004_c0_seq2
469bp
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0072372 C cilium
1434 O_BomaMG12067_complete:A_BomaMG_comp24004_c0_seq3
674bp
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0072372 C cilium
1435 O_BomaMG12070_internal:A_BomaMG_comp24005_c0_seq1
138bp
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1436 O_BomaMG12071_internal:A_BomaMG_comp24005_c1_seq1
403bp
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
1437 O_BomaMG12072_internal:A_BomaMG_comp24005_c2_seq1
348bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1438 O_BomaMG12073_internal:A_BomaMG_comp24005_c2_seq2
107bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1439 O_BomaMG12074_3prime_partial:A_BomaMG_comp24006_c0_seq1
589bp
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
1440 O_BomaMG12075_complete:A_BomaMG_comp24006_c1_seq1
533bp
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
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