SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16228
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11371 O_BomaMG3474_internal:A_BomaMG_comp16478_c1_seq1
105bp
putative_PHD_finger_protein_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
11372 O_BomaMG3475_complete:A_BomaMG_comp16480_c0_seq1
490bp
phosphoribosylaminoimidazole_carboxylase,_phosphoribosylaminoimidazole_succinocarboxamide_synthetase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002121 P inter-male aggressive behavior
GO:0003824 F catalytic activity
GO:0004638 F phosphoribosylaminoimidazole carboxylase activity
GO:0004639 F phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0016874 F ligase activity
GO:0046084 P adenine biosynthetic process
11373 O_BomaMG3476_internal:A_BomaMG_comp16484_c0_seq1
109bp
beta-1,3-glucan_recognition_protein_1_[Helicoverpa_armigera]
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
11374 O_BomaMG3477_3prime_partial:A_BomaMG_comp16486_c0_seq1
405bp
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
11375 O_BomaMG3478_5prime_partial:A_BomaMG_comp16486_c1_seq1
104bp
hypothetical_protein_KGM_16696_[Danaus_plexippus]
11376 O_BomaMG3479_complete:A_BomaMG_comp16487_c0_seq1
161bp
embryonic_development_factor_[Bombyx_mori]
GO:0005484 F SNAP receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0022008 P neurogenesis
GO:0031201 C SNARE complex
GO:0061025 P membrane fusion
GO:0071458 C integral component of cytoplasmic side of endoplasmic reticulum membrane
11377 O_BomaMG3480_complete:A_BomaMG_comp16487_c0_seq2
270bp
embryonic_development_factor_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007041 P lysosomal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030163 P protein catabolic process
GO:0032940 P secretion by cell
11378 O_BomaMG3481_internal:A_BomaMG_comp16491_c0_seq1
100bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
11379 O_BomaMG3482_internal:A_BomaMG_comp16491_c0_seq2
523bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0019233 P sensory perception of pain
GO:0019730 P antimicrobial humoral response
GO:0043066 P negative regulation of apoptotic process
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051298 P centrosome duplication
11380 O_BomaMG3487_internal:A_BomaMG_comp16491_c0_seq3
244bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001955 P blood vessel maturation
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006275 P regulation of DNA replication
GO:0016020 C membrane
GO:0016032 P viral process
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045787 P positive regulation of cell cycle
GO:0051151 P negative regulation of smooth muscle cell differentiation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1900245 P positive regulation of MDA-5 signaling pathway
GO:1900246 P positive regulation of RIG-I signaling pathway
11381 O_BomaMG3489_complete:A_BomaMG_comp16492_c0_seq1
312bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
11382 O_BomaMG3490_complete:A_BomaMG_comp16492_c0_seq2
310bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
11383 O_BomaMG3491_complete:A_BomaMG_comp16493_c0_seq1
602bp
vasa-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
11384 O_BomaMG3493_complete:A_BomaMG_comp16494_c0_seq1
333bp
PREDICTED:_probable_isoaspartyl_peptidase/L-asparaginase_GA20639_isoform_X1_[Bombyx_mori]
GO:0004067 F asparaginase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008798 F beta-aspartyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0033345 P asparagine catabolic process via L-aspartate
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
11385 O_BomaMG3494_complete:A_BomaMG_comp16496_c0_seq1
396bp
Mitochondrial_ribosomal_protein_S9_[Operophtera_brumata]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 F structural constituent of ribosome
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
11386 O_BomaMG3495_complete:A_BomaMG_comp16497_c0_seq2
126bp
Zinc_finger_HIT_domain-containing_protein_3_[Operophtera_brumata]
GO:0046872 F metal ion binding
11387 O_BomaMG3496_5prime_partial:A_BomaMG_comp16498_c1_seq1
120bp
PREDICTED:_calmodulin-binding_transcription_activator_2_[Bombyx_mori]
11388 O_BomaMG3497_internal:A_BomaMG_comp16502_c0_seq1
110bp
hypothetical_protein_RR48_05808_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004402 F histone acetyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0007275 P multicellular organism development
GO:0008033 P tRNA processing
GO:0008080 F N-acetyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0022008 P neurogenesis
11389 O_BomaMG3498_complete:A_BomaMG_comp16503_c0_seq1
254bp
hypothetical_protein_OBRU01_12883_[Operophtera_brumata]
11390 O_BomaMG3499_3prime_partial:A_BomaMG_comp16509_c0_seq1
416bp
PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
11391 O_BomaMG349_internal:A_BomaMG_comp7799_c0_seq1
115bp
11392 O_BomaMG34_internal:A_BomaMG_comp915_c0_seq1
170bp
11393 O_BomaMG3502_5prime_partial:A_BomaMG_comp16515_c0_seq1
195bp
PREDICTED:_protein_MCM10_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0016321 P female meiosis chromosome segregation
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0035214 P eye-antennal disc development
GO:0042023 P DNA endoreduplication
GO:0045678 P positive regulation of R7 cell differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046872 F metal ion binding
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:1901693 P negative regulation of compound eye retinal cell apoptotic process
11394 O_BomaMG3503_complete:A_BomaMG_comp16518_c0_seq1
1001bp
parp_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005634 C nucleus
GO:0006471 P protein ADP-ribosylation
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
11395 O_BomaMG3505_complete:A_BomaMG_comp16521_c0_seq1
534bp
antennal_esterase_CXE11_[Spodoptera_littoralis]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
11396 O_BomaMG3508_5prime_partial:A_BomaMG_comp16522_c0_seq1
159bp
PREDICTED:_peritrophin-1-like_[Amyelois_transitella]
11397 O_BomaMG350_internal:A_BomaMG_comp7923_c0_seq1
158bp
11398 O_BomaMG3510_complete:A_BomaMG_comp16524_c0_seq1
402bp
myocyte_enhancing_factor_2_isoform_B_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007496 P anterior midgut development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0010468 P regulation of gene expression
GO:0016202 P regulation of striated muscle tissue development
GO:0019730 P antimicrobial humoral response
GO:0019915 P lipid storage
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045475 P locomotor rhythm
GO:0046983 F protein dimerization activity
GO:0048747 P muscle cell development
GO:0052576 P carbohydrate storage
11399 O_BomaMG3513_complete:A_BomaMG_comp16524_c0_seq2
406bp
myocyte_enhancing_factor_2_isoform_A_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007496 P anterior midgut development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0010468 P regulation of gene expression
GO:0016202 P regulation of striated muscle tissue development
GO:0019730 P antimicrobial humoral response
GO:0019915 P lipid storage
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045475 P locomotor rhythm
GO:0046983 F protein dimerization activity
GO:0048747 P muscle cell development
GO:0052576 P carbohydrate storage
11400 O_BomaMG3516_complete:A_BomaMG_comp16525_c0_seq1
117bp
PREDICTED:_uncharacterized_protein_LOC101746156_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
previous next from show/16228

- SilkBase 1999-2023 -