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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11191 O_BomaMG3235_complete:A_BomaMG_comp16115_c1_seq1
220bp
PREDICTED:_uncharacterized_protein_LOC106132715_[Amyelois_transitella]
11192 O_BomaMG3236_internal:A_BomaMG_comp16118_c0_seq1
227bp
PREDICTED:_glycosyltransferase-like_protein_LARGE1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0005794 C Golgi apparatus
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0006688 P glycosphingolipid biosynthetic process
GO:0008152 P metabolic process
GO:0008375 F acetylglucosaminyltransferase activity
GO:0009101 P glycoprotein biosynthetic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030145 F manganese ion binding
GO:0030173 C integral component of Golgi membrane
GO:0035252 F UDP-xylosyltransferase activity
GO:0035269 P protein O-linked mannosylation
GO:0042285 F xylosyltransferase activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043403 P skeletal muscle tissue regeneration
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0060538 P skeletal muscle organ development
11193 O_BomaMG3237_5prime_partial:A_BomaMG_comp16119_c0_seq1
458bp
PREDICTED:_DNA_polymerase_theta-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0071897 P DNA biosynthetic process
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
11194 O_BomaMG3238_internal:A_BomaMG_comp16119_c1_seq1
400bp
PREDICTED:_DNA_polymerase_theta-like_[Bombyx_mori]
11195 O_BomaMG3239_internal:A_BomaMG_comp16120_c0_seq1
101bp
PREDICTED:_nesprin-1-like_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11196 O_BomaMG323_internal:A_BomaMG_comp6573_c0_seq1
101bp
11197 O_BomaMG3240_internal:A_BomaMG_comp16120_c1_seq1
203bp
PREDICTED:_nesprin-1-like_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
11198 O_BomaMG3242_internal:A_BomaMG_comp16123_c1_seq1
103bp
PREDICTED:_trimethylguanosine_synthase_[Bombyx_mori]
GO:0001510 P RNA methylation
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0009452 P 7-methylguanosine RNA capping
GO:0015030 C Cajal body
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0036261 P 7-methylguanosine cap hypermethylation
GO:0071164 F RNA trimethylguanosine synthase activity
11199 O_BomaMG3244_internal:A_BomaMG_comp16125_c0_seq1
222bp
PREDICTED:_Fanconi_anemia,_complementation_group_I_isoform_X3_[Bombyx_mori]
11200 O_BomaMG3245_internal:A_BomaMG_comp16126_c0_seq1
213bp
PREDICTED:_zinc_finger_protein_35_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0051607 P defense response to virus
11201 O_BomaMG3247_3prime_partial:A_BomaMG_comp16130_c0_seq1
130bp
PREDICTED:_uncharacterized_protein_LOC101746247_isoform_X2_[Bombyx_mori]
11202 O_BomaMG3248_internal:A_BomaMG_comp16131_c0_seq1
284bp
PREDICTED:_lysosome-associated_membrane_glycoprotein_1-like_[Papilio_xuthus]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11203 O_BomaMG324_complete:A_BomaMG_comp6759_c0_seq1
182bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0007059 P chromosome segregation
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030707 P ovarian follicle cell development
GO:0046872 F metal ion binding
GO:0071174 P mitotic spindle checkpoint signaling
11204 O_BomaMG3250_internal:A_BomaMG_comp16135_c0_seq1
130bp
PREDICTED:_zinc_finger_protein_845-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
11205 O_BomaMG3251_internal:A_BomaMG_comp16136_c0_seq1
228bp
BMA-SHP-1_[Brugia_malayi]
11206 O_BomaMG3254_5prime_partial:A_BomaMG_comp16137_c0_seq1
361bp
PREDICTED:_CCAAT/enhancer-binding_protein_zeta_[Amyelois_transitella]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
11207 O_BomaMG3257_internal:A_BomaMG_comp16138_c0_seq1
106bp
PREDICTED:_tigger_transposable_element-derived_protein_1-like,_partial_[Diaphorina_citri]
11208 O_BomaMG3258_complete:A_BomaMG_comp16140_c0_seq1
181bp
PREDICTED:_death-associated_small_cytoplasmic_leucine-rich_protein_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
11209 O_BomaMG3259_internal:A_BomaMG_comp16143_c0_seq1
209bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
11210 O_BomaMG325_internal:A_BomaMG_comp6792_c0_seq1
116bp
11211 O_BomaMG3260_internal:A_BomaMG_comp16145_c0_seq1
190bp
PREDICTED:_uncharacterized_protein_LOC105398307_[Plutella_xylostella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007283 P spermatogenesis
GO:0007584 P response to nutrient
GO:0030879 P mammary gland development
GO:0031619 P homologous chromosome orientation involved in meiotic metaphase I plate congression
GO:0032355 P response to estradiol
GO:0035264 P multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
11212 O_BomaMG3262_internal:A_BomaMG_comp16147_c0_seq1
447bp
hypothetical_protein_KGM_11261_[Danaus_plexippus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
11213 O_BomaMG3263_internal:A_BomaMG_comp16147_c0_seq2
505bp
PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
11214 O_BomaMG3264_3prime_partial:A_BomaMG_comp16149_c0_seq2
136bp
PREDICTED:_tyrosine-protein_kinase_Btk29A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
11215 O_BomaMG3265_complete:A_BomaMG_comp16151_c0_seq1
405bp
cdc2-related_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0051726 P regulation of cell cycle
GO:0097472 F cyclin-dependent protein kinase activity
11216 O_BomaMG3267_internal:A_BomaMG_comp16152_c0_seq1
212bp
PREDICTED:_uncharacterized_protein_LOC106111259_[Papilio_polytes]
11217 O_BomaMG3268_3prime_partial:A_BomaMG_comp16161_c0_seq1
169bp
PREDICTED:_arrestin_domain-containing_protein_4_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0031410 C cytoplasmic vesicle
11218 O_BomaMG3269_internal:A_BomaMG_comp16162_c0_seq1
330bp
PREDICTED:_zinc_finger_HIT_domain-containing_protein_2_[Papilio_xuthus]
GO:0046872 F metal ion binding
11219 O_BomaMG326_internal:A_BomaMG_comp6806_c0_seq1
125bp
GO:0007155 P cell adhesion
GO:0030246 F carbohydrate binding
11220 O_BomaMG3270_3prime_partial:A_BomaMG_comp16167_c0_seq1
172bp
p53_[Bombyx_mori]
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