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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1081 O_BomaMG1151_internal:A_BomaMG_comp11996_c0_seq1
181bp
PREDICTED:_LOW_QUALITY_PROTEIN:_tuberin_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006469 P negative regulation of protein kinase activity
GO:0006606 P protein import into nucleus
GO:0006897 P endocytosis
GO:0007050 P regulation of cell cycle
GO:0007507 P heart development
GO:0008104 P protein localization
GO:0008285 P negative regulation of cell population proliferation
GO:0014067 P negative regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016192 P vesicle-mediated transport
GO:0019902 F phosphatase binding
GO:0030100 P regulation of endocytosis
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031267 F small GTPase binding
GO:0032007 P negative regulation of TOR signaling
GO:0033596 C TSC1-TSC2 complex
GO:0042803 F protein homodimerization activity
GO:0043491 P protein kinase B signaling
GO:0043547 P positive regulation of GTPase activity
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0048009 P insulin-like growth factor receptor signaling pathway
GO:0048471 C perinuclear region of cytoplasm
GO:0050918 P positive chemotaxis
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0051726 P regulation of cell cycle
GO:0051898 P negative regulation of protein kinase B signaling
1082 O_BomaMG11520_internal:A_BomaMG_comp23796_c1_seq1
1231bp
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005811 C lipid droplet
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0034045 C phagophore assembly site membrane
GO:0044804 P autophagy of nucleus
1083 O_BomaMG11521_internal:A_BomaMG_comp23796_c2_seq1
138bp
1084 O_BomaMG11523_complete:A_BomaMG_comp23797_c1_seq1
209bp
GO:0000166 F nucleotide binding
GO:0001654 P eye development
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0009925 C basal plasma membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0019003 F GDP binding
GO:0034389 P lipid droplet organization
GO:0070062 C extracellular exosome
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
1085 O_BomaMG11524_complete:A_BomaMG_comp23799_c0_seq1
731bp
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
1086 O_BomaMG11525_complete:A_BomaMG_comp23799_c0_seq1
181bp
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
1087 O_BomaMG11527_complete:A_BomaMG_comp23800_c0_seq1
403bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1088 O_BomaMG11528_complete:A_BomaMG_comp23800_c0_seq1
204bp
1089 O_BomaMG1152_3prime_partial:A_BomaMG_comp11999_c0_seq1
258bp
PREDICTED:_PH_and_SEC7_domain-containing_protein_2_isoform_X3_[Bombyx_mori]
GO:0001726 C ruffle
GO:0005737 C cytoplasm
GO:0005902 C microvillus
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0012505 C endomembrane system
GO:0014067 P negative regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0017081 F chloride channel regulator activity
GO:0030175 C filopodium
GO:0031528 C microvillus membrane
GO:0032782 P bile acid secretion
GO:0032947 F molecular adaptor activity
GO:0034635 P glutathione transport
GO:0042995 C cell projection
GO:0045859 P regulation of protein kinase activity
GO:0051898 P negative regulation of protein kinase B signaling
GO:0070293 P renal absorption
GO:0071944 C cell periphery
GO:2000146 P negative regulation of cell motility
1090 O_BomaMG11530_complete:A_BomaMG_comp23802_c0_seq1
424bp
1091 O_BomaMG11531_complete:A_BomaMG_comp23803_c0_seq1
244bp
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0007338 P single fertilization
GO:0007342 P fusion of sperm to egg plasma membrane involved in single fertilization
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0009414 P response to water deprivation
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0014003 P oligodendrocyte development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0030913 P paranodal junction assembly
GO:0031623 P receptor internalization
GO:0070062 C extracellular exosome
GO:0071404 P cellular response to low-density lipoprotein particle stimulus
GO:1903561 C extracellular vesicle
1092 O_BomaMG11532_3prime_partial:A_BomaMG_comp23804_c0_seq1
2409bp
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
1093 O_BomaMG11535_3prime_partial:A_BomaMG_comp23804_c0_seq2
2159bp
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
1094 O_BomaMG11538_complete:A_BomaMG_comp23805_c0_seq1
966bp
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
1095 O_BomaMG1153_internal:A_BomaMG_comp12001_c0_seq1
345bp
PREDICTED:_uncharacterized_protein_LOC101739352_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
1096 O_BomaMG11540_3prime_partial:A_BomaMG_comp23806_c0_seq1
146bp
1097 O_BomaMG11542_3prime_partial:A_BomaMG_comp23806_c0_seq2
251bp
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008283 P cell population proliferation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0044822 F RNA binding
GO:0050684 P regulation of mRNA processing
GO:0051726 P regulation of cell cycle
1098 O_BomaMG11543_complete:A_BomaMG_comp23806_c0_seq3
604bp
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008283 P cell population proliferation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0044822 F RNA binding
GO:0050684 P regulation of mRNA processing
GO:0051726 P regulation of cell cycle
1099 O_BomaMG11545_3prime_partial:A_BomaMG_comp23806_c0_seq4
860bp
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0034126 P positive regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0051726 P regulation of cell cycle
1100 O_BomaMG11547_3prime_partial:A_BomaMG_comp23807_c0_seq1
206bp
GO:0004346 F glucose-6-phosphatase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006094 P gluconeogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0042593 P glucose homeostasis
GO:0050796 P regulation of insulin secretion
GO:0051156 P glucose 6-phosphate metabolic process
1101 O_BomaMG11548_complete:A_BomaMG_comp23808_c0_seq1
856bp
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
1102 O_BomaMG11550_internal:A_BomaMG_comp23810_c0_seq1
284bp
GO:0000139 C Golgi membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0032527 P protein exit from endoplasmic reticulum
GO:0048208 P COPII vesicle coating
GO:0070971 C endoplasmic reticulum exit site
GO:0070973 P protein localization to endoplasmic reticulum exit site
1103 O_BomaMG11556_3prime_partial:A_BomaMG_comp23810_c0_seq2
174bp
GO:0000139 C Golgi membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0032527 P protein exit from endoplasmic reticulum
GO:0048208 P COPII vesicle coating
GO:0070971 C endoplasmic reticulum exit site
GO:0070973 P protein localization to endoplasmic reticulum exit site
1104 O_BomaMG11559_complete:A_BomaMG_comp23814_c0_seq1
711bp
1105 O_BomaMG1155_5prime_partial:A_BomaMG_comp12013_c0_seq1
461bp
PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
1106 O_BomaMG11560_complete:A_BomaMG_comp23815_c0_seq1
155bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0051087 F chaperone binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0071816 P tail-anchored membrane protein insertion into ER membrane
GO:0071818 C BAT3 complex
GO:1904378 P maintenance of unfolded protein involved in ERAD pathway
1107 O_BomaMG11562_complete:A_BomaMG_comp23815_c0_seq2
317bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0051087 F chaperone binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0071816 P tail-anchored membrane protein insertion into ER membrane
GO:0071818 C BAT3 complex
GO:1904378 P maintenance of unfolded protein involved in ERAD pathway
1108 O_BomaMG11563_internal:A_BomaMG_comp23816_c0_seq1
736bp
1109 O_BomaMG11566_complete:A_BomaMG_comp23818_c0_seq1
158bp
1110 O_BomaMG11567_complete:A_BomaMG_comp23820_c0_seq1
269bp
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
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