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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10441 O_BomaMG25387_internal:A_BomaMG_comp316848_c0_seq1
176bp
10442 O_BomaMG25389_internal:A_BomaMG_comp316989_c0_seq1
126bp
GO:0001664 F G protein-coupled receptor binding
GO:0001948 F protein binding
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007195 P adenylate cyclase-inhibiting dopamine receptor signaling pathway
GO:0008134 F transcription factor binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016479 P negative regulation of transcription by RNA polymerase I
GO:0017048 F small GTPase binding
GO:0017160 F small GTPase binding
GO:0019900 F kinase binding
GO:0030030 P cell projection organization
GO:0030168 P platelet activation
GO:0030334 P regulation of cell migration
GO:0030863 C cortical cytoskeleton
GO:0031267 F small GTPase binding
GO:0031523 C Myb complex
GO:0031532 P actin cytoskeleton reorganization
GO:0031852 F mu-type opioid receptor binding
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0034329 P cell junction assembly
GO:0034394 P protein localization to cell surface
GO:0034988 F Fc-gamma receptor I complex binding
GO:0042177 P negative regulation of protein catabolic process
GO:0042384 P cilium assembly
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0042993 P obsolete positive regulation of transcription factor import into nucleus
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0043113 P receptor clustering
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043198 C dendritic shaft
GO:0043234 C protein-containing complex
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044319 P wound healing, spreading of cells
GO:0044822 F RNA binding
GO:0045184 P establishment of protein localization
GO:0046332 F SMAD binding
GO:0048365 F small GTPase binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
GO:0051015 F actin filament binding
GO:0051020 F GTPase binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051764 P actin crosslink formation
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
GO:0071526 P semaphorin-plexin signaling pathway
GO:0090307 P mitotic spindle assembly
GO:0097440 C apical dendrite
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:2001046 P positive regulation of integrin-mediated signaling pathway
10443 O_BomaMG2538_internal:A_BomaMG_comp14315_c0_seq1
239bp
PREDICTED:_protein_phosphatase_2C-like_domain-containing_protein_1_[Thamnophis_sirtalis]
10444 O_BomaMG25390_3prime_partial:A_BomaMG_comp317203_c0_seq1
285bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10445 O_BomaMG25391_internal:A_BomaMG_comp317233_c0_seq1
145bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0016035 C zeta DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10446 O_BomaMG25392_internal:A_BomaMG_comp317408_c0_seq1
104bp
10447 O_BomaMG25393_internal:A_BomaMG_comp317513_c0_seq1
100bp
10448 O_BomaMG25395_internal:A_BomaMG_comp317663_c0_seq1
155bp
10449 O_BomaMG25396_internal:A_BomaMG_comp317757_c0_seq1
137bp
10450 O_BomaMG25397_3prime_partial:A_BomaMG_comp317963_c0_seq1
111bp
10451 O_BomaMG25398_internal:A_BomaMG_comp318262_c0_seq1
120bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10452 O_BomaMG25399_internal:A_BomaMG_comp318273_c0_seq1
127bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071333 P cellular response to glucose stimulus
10453 O_BomaMG2539_internal:A_BomaMG_comp14317_c0_seq1
181bp
PREDICTED:_tudor_and_KH_domain-containing_protein_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0009566 P fertilization
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0071546 C pi-body
GO:0071547 C piP-body
10454 O_BomaMG25400_internal:A_BomaMG_comp318323_c0_seq1
104bp
10455 O_BomaMG25401_internal:A_BomaMG_comp318486_c0_seq1
112bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10456 O_BomaMG25403_internal:A_BomaMG_comp319193_c0_seq1
127bp
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
10457 O_BomaMG25404_internal:A_BomaMG_comp319264_c0_seq1
142bp
10458 O_BomaMG25405_internal:A_BomaMG_comp319462_c0_seq1
111bp
GO:0001525 P angiogenesis
GO:0001886 P endothelial cell morphogenesis
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0007601 P visual perception
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009887 P animal organ morphogenesis
GO:0030198 P extracellular matrix organization
GO:0030335 P positive regulation of cell migration
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0042493 P response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0051599 P response to hydrostatic pressure
GO:0070062 C extracellular exosome
GO:2000353 P positive regulation of endothelial cell apoptotic process
10459 O_BomaMG25407_3prime_partial:A_BomaMG_comp320111_c0_seq1
100bp
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
10460 O_BomaMG25408_internal:A_BomaMG_comp320228_c0_seq1
131bp
10461 O_BomaMG25411_internal:A_BomaMG_comp321284_c0_seq1
120bp
10462 O_BomaMG25412_internal:A_BomaMG_comp321361_c0_seq1
127bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
10463 O_BomaMG25413_internal:A_BomaMG_comp321444_c0_seq1
132bp
GO:0000166 F nucleotide binding
GO:0000911 P cytokinesis by cell plate formation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0009524 C phragmoplast
GO:0009558 P embryo sac cellularization
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
10464 O_BomaMG25414_internal:A_BomaMG_comp321490_c0_seq1
124bp
10465 O_BomaMG25415_internal:A_BomaMG_comp321693_c0_seq1
124bp
10466 O_BomaMG25416_internal:A_BomaMG_comp321813_c0_seq1
161bp
10467 O_BomaMG25418_internal:A_BomaMG_comp321988_c0_seq1
109bp
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0032483 P regulation of Rab protein signal transduction
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
10468 O_BomaMG25419_internal:A_BomaMG_comp322033_c0_seq1
108bp
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008017 F microtubule binding
GO:0008088 P axo-dendritic transport
GO:0008355 P olfactory learning
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015630 C microtubule cytoskeleton
GO:0019900 F kinase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0043025 C neuronal cell body
GO:0043524 P negative regulation of neuron apoptotic process
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0060052 P neurofilament cytoskeleton organization
GO:1901215 P negative regulation of neuron death
10469 O_BomaMG2541_3prime_partial:A_BomaMG_comp14321_c0_seq1
203bp
c-myc_[Bombyx_mori]
10470 O_BomaMG25420_internal:A_BomaMG_comp322062_c0_seq1
100bp
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