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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1 O_BomaMG10000_complete:A_BomaMG_comp23040_c0_seq1
143bp
PREDICTED:_thioredoxin-like_protein_4A_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0051301 P cell division
2 O_BomaMG10001_complete:A_BomaMG_comp23041_c0_seq1
290bp
PREDICTED:_ubiquitin_domain-containing_protein_UBFD1-like_[Bombyx_mori]
GO:0044822 F RNA binding
3 O_BomaMG10002_complete:A_BomaMG_comp23042_c0_seq1
474bp
hypothetical_protein_OBRU01_13301_[Operophtera_brumata]
4 O_BomaMG10003_5prime_partial:A_BomaMG_comp23043_c0_seq1
357bp
PREDICTED:_vesicular_integral-membrane_protein_VIP36_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005537 F mannose binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006457 P protein folding
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
5 O_BomaMG10004_complete:A_BomaMG_comp23044_c0_seq1
331bp
PREDICTED:_3-ketodihydrosphingosine_reductase_[Amyelois_transitella]
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006666 P 3-keto-sphinganine metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0047560 F 3-dehydrosphinganine reductase activity
GO:0055114 P obsolete oxidation-reduction process
6 O_BomaMG10005_complete:A_BomaMG_comp23045_c0_seq1
311bp
Peroxisomal_targeting_signal_2_receptor_[Papilio_xuthus]
GO:0001764 P neuron migration
GO:0001958 P endochondral ossification
GO:0005053 F peroxisome matrix targeting signal-2 binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008611 P ether lipid biosynthetic process
GO:0015031 P protein transport
GO:0016558 P protein import into peroxisome matrix
GO:0019899 F enzyme binding
GO:0042803 F protein homodimerization activity
7 O_BomaMG10006_complete:A_BomaMG_comp23047_c0_seq1
342bp
PREDICTED:_zinc_transporter_7_[Papilio_machaon]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
GO:0098655 P cation transmembrane transport
8 O_BomaMG10007_complete:A_BomaMG_comp23047_c0_seq2
342bp
PREDICTED:_zinc_transporter_7_[Papilio_machaon]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
GO:0098655 P cation transmembrane transport
9 O_BomaMG10008_3prime_partial:A_BomaMG_comp23048_c0_seq2
292bp
WW_domain_binding_protein_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0046872 F metal ion binding
GO:0070064 F proline-rich region binding
10 O_BomaMG1000_internal:A_BomaMG_comp11759_c0_seq1
140bp
PREDICTED:_uncharacterized_protein_LOC101746233_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004993 F G protein-coupled serotonin receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006939 P smooth muscle contraction
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007210 P serotonin receptor signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007623 P circadian rhythm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042310 P vasoconstriction
11 O_BomaMG10011_3prime_partial:A_BomaMG_comp23048_c0_seq4
199bp
WW_domain_binding_protein_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0046872 F metal ion binding
12 O_BomaMG10012_5prime_partial:A_BomaMG_comp23049_c1_seq1
612bp
PREDICTED:_apoptosis-inducing_factor_3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0006915 P apoptotic process
GO:0016491 F oxidoreductase activity
GO:0045454 P cell redox homeostasis
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0097194 P execution phase of apoptosis
13 O_BomaMG10013_complete:A_BomaMG_comp23050_c0_seq1
147bp
multiprotein_bridging_factor_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
14 O_BomaMG10014_5prime_partial:A_BomaMG_comp23051_c0_seq1
164bp
PREDICTED:_uncharacterized_protein_LOC105233465,_partial_[Bactrocera_dorsalis]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
15 O_BomaMG10016_5prime_partial:A_BomaMG_comp23051_c1_seq1
200bp
PREDICTED:_ATP-dependent_DNA_helicase_PIF1-like_[Bactrocera_dorsalis]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0043141 F 5'-3' DNA helicase activity
GO:0044806 P G-quadruplex DNA unwinding
GO:0051276 P chromosome organization
GO:0051974 P negative regulation of telomerase activity
16 O_BomaMG10018_complete:A_BomaMG_comp23055_c0_seq1
222bp
PREDICTED:_recQ-mediated_genome_instability_protein_1-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
17 O_BomaMG10019_3prime_partial:A_BomaMG_comp23055_c0_seq1
155bp
PREDICTED:_recQ-mediated_genome_instability_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
18 O_BomaMG1001_3prime_partial:A_BomaMG_comp11760_c0_seq1
456bp
PREDICTED:_zinc_finger_CCHC_domain-containing_protein_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
19 O_BomaMG10021_3prime_partial:A_BomaMG_comp23055_c0_seq2
155bp
PREDICTED:_recQ-mediated_genome_instability_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
20 O_BomaMG10022_complete:A_BomaMG_comp23055_c0_seq2
139bp
PREDICTED:_recQ-mediated_genome_instability_protein_1-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
21 O_BomaMG10024_5prime_partial:A_BomaMG_comp23056_c2_seq1
136bp
PREDICTED:_uncharacterized_protein_LOC101736037_isoform_X3_[Bombyx_mori]
22 O_BomaMG10025_5prime_partial:A_BomaMG_comp23059_c0_seq1
103bp
23 O_BomaMG10026_complete:A_BomaMG_comp23062_c0_seq1
549bp
28S_ribosomal_protein_S30,_mitochondrial_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
24 O_BomaMG10027_complete:A_BomaMG_comp23063_c0_seq1
477bp
PREDICTED:_rab11_family-interacting_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0045055 P regulated exocytosis
GO:0055037 C recycling endosome
GO:0070164 P negative regulation of adiponectin secretion
25 O_BomaMG10029_complete:A_BomaMG_comp23064_c0_seq1
360bp
PREDICTED:_zinc_transporter_1_[Papilio_polytes]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
26 O_BomaMG10030_5prime_partial:A_BomaMG_comp23064_c0_seq1
108bp
27 O_BomaMG10032_complete:A_BomaMG_comp23065_c1_seq1
256bp
Uncharacterized_protein_OBRU01_05786,_partial_[Operophtera_brumata]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
28 O_BomaMG10033_complete:A_BomaMG_comp23065_c1_seq2
256bp
Uncharacterized_protein_OBRU01_05786,_partial_[Operophtera_brumata]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
29 O_BomaMG10034_complete:A_BomaMG_comp23067_c0_seq1
3260bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0007399 P nervous system development
GO:0007626 P locomotory behavior
GO:0008104 P protein localization
GO:0015031 P protein transport
GO:0019898 C extrinsic component of membrane
GO:0031045 C dense core granule
GO:0035176 P social behavior
GO:0045053 P protein retention in Golgi apparatus
30 O_BomaMG10038_complete:A_BomaMG_comp23067_c0_seq2
3278bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0007399 P nervous system development
GO:0007626 P locomotory behavior
GO:0008104 P protein localization
GO:0015031 P protein transport
GO:0019898 C extrinsic component of membrane
GO:0031045 C dense core granule
GO:0035176 P social behavior
GO:0045053 P protein retention in Golgi apparatus
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