Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
961	O_BomaASG10866_internal:A_BomaASG_c28721_g1_i1 106bp		uncharacterized_protein_LOC101746808_[Bombyx_mori]
962	O_BomaASG10867_5prime_partial:A_BomaASG_c28722_g1_i1 164bp		TATA-binding_protein-associated_factor_2N-like_[Bombyx_mori]
963	O_BomaASG10868_3prime_partial:A_BomaASG_c28722_g1_i1 125bp
964	O_BomaASG10869_complete:A_BomaASG_c28724_g1_i1 734bp		putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003725 F double-stranded RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005689 C U12-type spliceosomal complex GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0008026 F helicase activity GO:0008380 P RNA splicing GO:0009636 P response to toxic substance GO:0016787 F hydrolase activity GO:0043279 P response to alkaloid GO:0044822 F RNA binding GO:0071008 C U2-type post-mRNA release spliceosomal complex
965	O_BomaASG1086_internal:A_BomaASG_c7310_g1_i1 181bp		Iron-regulated_protein_frpC_[Operophtera_brumata]
966	O_BomaASG10870_complete:A_BomaASG_c28725_g1_i2 464bp		LOW_QUALITY_PROTEIN:_Golgi_pH_regulator_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005244 F voltage-gated ion channel activity GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0006811 P ion transport GO:0015031 P protein transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034765 P regulation of ion transmembrane transport
967	O_BomaASG10871_complete:A_BomaASG_c28728_g1_i1 487bp		retinal_dehydrogenase_1_[Bombyx_mori]	GO:0001758 F retinal dehydrogenase activity GO:0005737 C cytoplasm GO:0008152 P metabolic process GO:0016491 F oxidoreductase activity GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0042572 P retinol metabolic process GO:0055114 P obsolete oxidation-reduction process
968	O_BomaASG10872_complete:A_BomaASG_c28728_g1_i2 223bp		retinal_dehydrogenase_1_[Bombyx_mori]	GO:0004028 F 3-chloroallyl aldehyde dehydrogenase activity GO:0004029 F aldehyde dehydrogenase (NAD+) activity GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006068 P ethanol catabolic process GO:0008152 P metabolic process GO:0016491 F oxidoreductase activity GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0018479 F benzaldehyde dehydrogenase (NAD+) activity GO:0035106 P operant conditioning GO:0042802 F identical protein binding GO:0051289 P protein homotetramerization GO:0055114 P obsolete oxidation-reduction process
969	O_BomaASG10873_complete:A_BomaASG_c28729_g1_i1 423bp		AP-1_complex_subunit_mu-1_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005515 F protein binding GO:0005765 C lysosomal membrane GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0015031 P protein transport GO:0016020 C membrane GO:0016032 P viral process GO:0016192 P vesicle-mediated transport GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0030131 C clathrin adaptor complex GO:0030659 C cytoplasmic vesicle membrane GO:0030665 C clathrin-coated vesicle membrane GO:0030669 C clathrin-coated endocytic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0032438 P melanosome organization GO:0032588 C trans-Golgi network membrane GO:0035646 P endosome to melanosome transport GO:0050690 P regulation of defense response to virus by virus GO:0070062 C extracellular exosome
970	O_BomaASG10874_internal:A_BomaASG_c28730_g2_i1 227bp		rho_GTPase-activating_protein_190_isoform_X3_[Bombyx_mori]	GO:0005096 F GTPase activator activity GO:0005525 F GTP binding GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007165 P signal transduction GO:0007264 P small GTPase mediated signal transduction GO:0007266 P Rho protein signal transduction GO:0007275 P multicellular organism development GO:0007415 P defasciculation of motor neuron axon GO:0016319 P mushroom body development GO:0030215 F semaphorin receptor binding GO:0043547 P positive regulation of GTPase activity GO:0045792 P negative regulation of cell size GO:0050770 P regulation of axonogenesis
971	O_BomaASG10875_5prime_partial:A_BomaASG_c28730_g2_i1 100bp
972	O_BomaASG10876_5prime_partial:A_BomaASG_c28731_g1_i1 304bp		carbohydrate-responsive_element-binding_protein_isoform_X5_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0008134 F transcription factor binding GO:0008284 P positive regulation of cell population proliferation GO:0009653 P anatomical structure morphogenesis GO:0010255 P glucose mediated signaling pathway GO:0033137 P negative regulation of peptidyl-serine phosphorylation GO:0035538 F carbohydrate response element binding GO:0035556 P intracellular signal transduction GO:0042593 P glucose homeostasis GO:0042803 F protein homodimerization activity GO:0045723 P positive regulation of fatty acid biosynthetic process GO:0045821 P positive regulation of glycolytic process GO:0045892 P negative regulation of transcription, DNA-templated GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046889 P positive regulation of lipid biosynthetic process GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0055089 P fatty acid homeostasis GO:0070328 P triglyceride homeostasis GO:0071157 P regulation of cell cycle GO:0071322 P cellular response to carbohydrate stimulus GO:0090324 P negative regulation of oxidative phosphorylation GO:2000505 P energy homeostasis
973	O_BomaASG10877_5prime_partial:A_BomaASG_c28731_g1_i1 207bp
974	O_BomaASG10878_complete:A_BomaASG_c28731_g1_i1 153bp
975	O_BomaASG10879_5prime_partial:A_BomaASG_c28731_g1_i1 136bp
976	O_BomaASG1087_5prime_partial:A_BomaASG_c7321_g1_i1 203bp		probable_ATP-dependent_RNA_helicase_DDX28_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0010501 P RNA secondary structure unwinding GO:0016787 F hydrolase activity GO:0019843 F rRNA binding GO:0035770 C ribonucleoprotein granule GO:0042254 P ribosome biogenesis GO:0042645 C mitochondrial nucleoid GO:0044822 F RNA binding GO:1902775 P mitochondrial large ribosomal subunit assembly
977	O_BomaASG10880_complete:A_BomaASG_c28731_g1_i1 120bp
978	O_BomaASG10881_5prime_partial:A_BomaASG_c28731_g1_i2 207bp
979	O_BomaASG10882_5prime_partial:A_BomaASG_c28731_g1_i2 180bp		carbohydrate-responsive_element-binding_protein_isoform_X5_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0008134 F transcription factor binding GO:0008284 P positive regulation of cell population proliferation GO:0009653 P anatomical structure morphogenesis GO:0010255 P glucose mediated signaling pathway GO:0033137 P negative regulation of peptidyl-serine phosphorylation GO:0035538 F carbohydrate response element binding GO:0035556 P intracellular signal transduction GO:0042593 P glucose homeostasis GO:0042803 F protein homodimerization activity GO:0045723 P positive regulation of fatty acid biosynthetic process GO:0045821 P positive regulation of glycolytic process GO:0045892 P negative regulation of transcription, DNA-templated GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046889 P positive regulation of lipid biosynthetic process GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0055089 P fatty acid homeostasis GO:0070328 P triglyceride homeostasis GO:0071157 P regulation of cell cycle GO:0071322 P cellular response to carbohydrate stimulus GO:0090324 P negative regulation of oxidative phosphorylation GO:2000505 P energy homeostasis
980	O_BomaASG10883_complete:A_BomaASG_c28731_g1_i2 153bp
981	O_BomaASG10884_complete:A_BomaASG_c28731_g1_i2 120bp
982	O_BomaASG10885_5prime_partial:A_BomaASG_c28731_g1_i3 121bp
983	O_BomaASG10886_complete:A_BomaASG_c28732_g1_i1 480bp		proton-coupled_amino_acid_transporter-like_protein_pathetic_[Bombyx_mori]	GO:0006810 P transport GO:0006865 P amino acid transport GO:0015180 F L-alanine transmembrane transporter activity GO:0015193 F L-proline transmembrane transporter activity GO:0015196 F L-tryptophan transmembrane transporter activity GO:0015293 F symporter activity GO:0015808 P L-alanine transport GO:0015824 P proline transport GO:0015827 P tryptophan transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0035524 P proline transmembrane transport GO:0055085 P transmembrane transport
984	O_BomaASG10887_complete:A_BomaASG_c28733_g1_i1 357bp		transmembrane_protein_68_isoform_X1_[Bombyx_mori]	GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016746 F acyltransferase activity
985	O_BomaASG10888_complete:A_BomaASG_c28734_g1_i2 336bp		uncharacterized_protein_LOC110379660_[Helicoverpa_armigera]
986	O_BomaASG10889_complete:A_BomaASG_c28734_g1_i2 155bp
987	O_BomaASG1088_internal:A_BomaASG_c7339_g1_i1 156bp		PHD_finger_protein_12_isoform_X2_[Helicoverpa_armigera]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001106 F transcription corepressor activity GO:0001222 F transcription corepressor binding GO:0003682 F chromatin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0016580 C Sin3 complex GO:0017053 C transcription repressor complex GO:0035091 F phosphatidylinositol binding GO:0042393 F histone binding GO:0045892 P negative regulation of transcription, DNA-templated GO:0046872 F metal ion binding
988	O_BomaASG10890_5prime_partial:A_BomaASG_c28734_g1_i3 223bp		uncharacterized_protein_LOC101735513_[Bombyx_mori]
989	O_BomaASG10891_complete:A_BomaASG_c28734_g1_i5 336bp		uncharacterized_protein_LOC110379660_[Helicoverpa_armigera]
990	O_BomaASG10892_complete:A_BomaASG_c28734_g1_i5 155bp