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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3961 O_BomaASG13566_complete:A_BomaASG_c30300_g1_i1
105bp
3962 O_BomaASG13567_complete:A_BomaASG_c30300_g1_i2
105bp
3963 O_BomaASG13568_3prime_partial:A_BomaASG_c30302_g1_i1
261bp
DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
3964 O_BomaASG13569_3prime_partial:A_BomaASG_c30303_g1_i2
142bp
thyroid_adenoma-associated_protein_homolog_[Bombyx_mori]
3965 O_BomaASG1356_3prime_partial:A_BomaASG_c9319_g1_i1
109bp
3966 O_BomaASG13570_5prime_partial:A_BomaASG_c30303_g1_i2
122bp
Histone-lysine_N-methyltransferase_SETMAR,_partial_[Harpegnathos_saltator]
3967 O_BomaASG13571_5prime_partial:A_BomaASG_c30304_g1_i2
295bp
uncharacterized_protein_LOC101737542_[Bombyx_mori]
3968 O_BomaASG13572_complete:A_BomaASG_c30304_g1_i2
113bp
3969 O_BomaASG13573_complete:A_BomaASG_c30304_g1_i3
265bp
uncharacterized_protein_LOC101737542_[Bombyx_mori]
3970 O_BomaASG13574_complete:A_BomaASG_c30304_g1_i3
113bp
3971 O_BomaASG13575_internal:A_BomaASG_c30305_g1_i1
801bp
dedicator_of_cytokinesis_protein_9_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
3972 O_BomaASG13576_complete:A_BomaASG_c30306_g1_i1
549bp
39S_ribosomal_protein_S30,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
3973 O_BomaASG13577_5prime_partial:A_BomaASG_c30306_g1_i2
516bp
39S_ribosomal_protein_S30,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
3974 O_BomaASG13578_internal:A_BomaASG_c30309_g1_i1
1306bp
uncharacterized_protein_LOC101744971_[Bombyx_mori]
3975 O_BomaASG13579_complete:A_BomaASG_c30309_g1_i1
166bp
3976 O_BomaASG1357_complete:A_BomaASG_c9319_g1_i2
383bp
TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
3977 O_BomaASG13580_3prime_partial:A_BomaASG_c30309_g1_i2
1498bp
uncharacterized_protein_LOC101744971_[Bombyx_mori]
3978 O_BomaASG13581_complete:A_BomaASG_c30309_g1_i2
166bp
3979 O_BomaASG13582_complete:A_BomaASG_c30310_g1_i1
438bp
eukaryotic_peptide_chain_release_factor_subunit_1_isoform_X1_[Bombyx_mori]
GO:0003747 F translation release factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006415 P translational termination
GO:0006605 P protein targeting
GO:0007224 P smoothened signaling pathway
GO:0008079 F translation termination factor activity
GO:0016149 F translation release factor activity, codon specific
GO:0018444 C translation release factor complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
3980 O_BomaASG13583_complete:A_BomaASG_c30312_g1_i1
457bp
uncharacterized_protein_LOC101738523_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3981 O_BomaASG13584_complete:A_BomaASG_c30312_g1_i1
177bp
3982 O_BomaASG13585_complete:A_BomaASG_c30312_g1_i1
103bp
3983 O_BomaASG13586_complete:A_BomaASG_c30312_g1_i2
391bp
uncharacterized_protein_LOC101738733_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3984 O_BomaASG13587_complete:A_BomaASG_c30312_g1_i2
174bp
3985 O_BomaASG13588_complete:A_BomaASG_c30312_g1_i3
457bp
uncharacterized_protein_LOC101738523_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3986 O_BomaASG13589_complete:A_BomaASG_c30312_g1_i3
177bp
3987 O_BomaASG1358_5prime_partial:A_BomaASG_c9319_g1_i2
155bp
3988 O_BomaASG13590_complete:A_BomaASG_c30312_g1_i3
103bp
3989 O_BomaASG13591_complete:A_BomaASG_c30312_g1_i4
361bp
uncharacterized_protein_LOC101738733_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3990 O_BomaASG13592_complete:A_BomaASG_c30312_g1_i4
185bp
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