SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32735
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3751 O_BomaASG13377_complete:A_BomaASG_c30200_g1_i3
113bp
3752 O_BomaASG13378_5prime_partial:A_BomaASG_c30200_g1_i4
196bp
uncharacterized_protein_LOC101746896_isoform_X3_[Bombyx_mori]
3753 O_BomaASG13379_complete:A_BomaASG_c30200_g1_i4
113bp
3754 O_BomaASG1337_complete:A_BomaASG_c9271_g1_i2
514bp
chorion_b-ZIP_transcription_factor_[Bombyx_mori]
3755 O_BomaASG13380_complete:A_BomaASG_c30201_g1_i1
171bp
uncharacterized_protein_LOC101735974_[Bombyx_mori]
3756 O_BomaASG13381_5prime_partial:A_BomaASG_c30202_g1_i1
205bp
UPF0553_protein_C9orf64_homolog_[Bombyx_mori]
3757 O_BomaASG13382_complete:A_BomaASG_c30205_g1_i1
256bp
INO80_complex_subunit_E_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0031011 C Ino80 complex
3758 O_BomaASG13383_complete:A_BomaASG_c30206_g1_i1
491bp
ADP-dependent_glucokinase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
3759 O_BomaASG13384_complete:A_BomaASG_c30206_g1_i2
491bp
ADP-dependent_glucokinase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0043843 F ADP-specific glucokinase activity
GO:0046872 F metal ion binding
3760 O_BomaASG13385_complete:A_BomaASG_c30207_g1_i1
364bp
rab11_family-interacting_protein_4A_isoform_X2_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0003700 F DNA-binding transcription factor activity
GO:0005509 F calcium ion binding
GO:0005768 C endosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030139 C endocytic vesicle
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048592 P eye morphogenesis
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055038 C recycling endosome membrane
3761 O_BomaASG13386_complete:A_BomaASG_c30207_g1_i2
447bp
rab11_family-interacting_protein_4A_isoform_X3_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0003700 F DNA-binding transcription factor activity
GO:0005509 F calcium ion binding
GO:0005768 C endosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030139 C endocytic vesicle
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048592 P eye morphogenesis
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055038 C recycling endosome membrane
3762 O_BomaASG13387_complete:A_BomaASG_c30207_g1_i3
348bp
rab11_family-interacting_protein_4A_isoform_X3_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0003700 F DNA-binding transcription factor activity
GO:0005509 F calcium ion binding
GO:0005768 C endosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030139 C endocytic vesicle
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048592 P eye morphogenesis
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055038 C recycling endosome membrane
3763 O_BomaASG13388_complete:A_BomaASG_c30208_g1_i1
169bp
actin_related_protein_2/3_complex_subunit_4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0015629 C actin cytoskeleton
GO:0019899 F enzyme binding
GO:0030041 P actin filament polymerization
GO:0030674 F protein-macromolecule adaptor activity
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
3764 O_BomaASG13389_internal:A_BomaASG_c30211_g1_i1
423bp
HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0044822 F RNA binding
3765 O_BomaASG1338_complete:A_BomaASG_c9271_g1_i2
125bp
chorion_b-ZIP_transcription_factor_[Danaus_plexippus_plexippus]
3766 O_BomaASG13390_complete:A_BomaASG_c30211_g1_i1
157bp
3767 O_BomaASG13391_internal:A_BomaASG_c30211_g1_i2
336bp
HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0044822 F RNA binding
3768 O_BomaASG13392_complete:A_BomaASG_c30211_g1_i2
101bp
3769 O_BomaASG13393_complete:A_BomaASG_c30212_g1_i1
372bp
KH_domain-containing,_RNA-binding,_signal_transduction-associated_protein_3_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017124 F SH3 domain binding
GO:0044822 F RNA binding
3770 O_BomaASG13394_complete:A_BomaASG_c30212_g1_i1
161bp
3771 O_BomaASG13395_3prime_partial:A_BomaASG_c30214_g1_i1
839bp
TATA_element_modulatory_factor_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001675 P acrosome assembly
GO:0001819 P positive regulation of cytokine production
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007286 P spermatid development
GO:0007289 P spermatid nucleus differentiation
GO:0008584 P male gonad development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0030317 P flagellated sperm motility
GO:0032275 P luteinizing hormone secretion
GO:0033327 P Leydig cell differentiation
GO:0042742 P defense response to bacterium
GO:0043066 P negative regulation of apoptotic process
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0071407 P cellular response to organic cyclic compound
GO:2000845 P positive regulation of testosterone secretion
3772 O_BomaASG13396_complete:A_BomaASG_c30214_g1_i1
139bp
3773 O_BomaASG13397_5prime_partial:A_BomaASG_c30214_g1_i1
112bp
3774 O_BomaASG13398_5prime_partial:A_BomaASG_c30215_g1_i1
309bp
serine/threonine_kinase_LKB1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001558 P regulation of cell growth
GO:0001894 P tissue homeostasis
GO:0001944 P vasculature development
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007409 P axonogenesis
GO:0008285 P negative regulation of cell population proliferation
GO:0010212 P response to ionizing radiation
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030010 P establishment of cell polarity
GO:0030111 P regulation of Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030275 F LRR domain binding
GO:0030295 F protein kinase activator activity
GO:0030308 P negative regulation of cell growth
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0032147 P activation of protein kinase activity
GO:0036398 C TCR signalosome
GO:0036399 P TCR signalosome assembly
GO:0042593 P glucose homeostasis
GO:0043276 P anoikis
GO:0045059 P positive thymic T cell selection
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048814 P regulation of dendrite morphogenesis
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050772 P positive regulation of axonogenesis
GO:0050852 P T cell receptor signaling pathway
GO:0051055 P negative regulation of lipid biosynthetic process
GO:0051645 P Golgi localization
GO:0051896 P regulation of protein kinase B signaling
GO:0060070 P canonical Wnt signaling pathway
GO:0060770 P negative regulation of epithelial cell proliferation involved in prostate gland development
GO:0070062 C extracellular exosome
GO:0071493 P cellular response to UV-B
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:0097484 P dendrite extension
GO:1900182 P positive regulation of protein localization to nucleus
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1904262 P negative regulation of TORC1 signaling
3775 O_BomaASG13399_5prime_partial:A_BomaASG_c30215_g1_i1
104bp
3776 O_BomaASG1339_complete:A_BomaASG_c9271_g1_i2
110bp
3777 O_BomaASG133_5prime_partial:A_BomaASG_c802_g1_i1
315bp
3778 O_BomaASG13400_5prime_partial:A_BomaASG_c30215_g1_i2
255bp
serine/threonine_kinase_LKB1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0001944 P vasculature development
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0010212 P response to ionizing radiation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030010 P establishment of cell polarity
GO:0030295 F protein kinase activator activity
GO:0030308 P negative regulation of cell growth
GO:0032147 P activation of protein kinase activity
GO:0042593 P glucose homeostasis
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
3779 O_BomaASG13401_5prime_partial:A_BomaASG_c30215_g1_i2
104bp
3780 O_BomaASG13402_5prime_partial:A_BomaASG_c30215_g1_i3
157bp
serine/threonine_kinase_LKB1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001558 P regulation of cell growth
GO:0001894 P tissue homeostasis
GO:0001944 P vasculature development
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007409 P axonogenesis
GO:0008285 P negative regulation of cell population proliferation
GO:0010212 P response to ionizing radiation
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030010 P establishment of cell polarity
GO:0030111 P regulation of Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030275 F LRR domain binding
GO:0030295 F protein kinase activator activity
GO:0030308 P negative regulation of cell growth
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0032147 P activation of protein kinase activity
GO:0036398 C TCR signalosome
GO:0036399 P TCR signalosome assembly
GO:0042593 P glucose homeostasis
GO:0043276 P anoikis
GO:0045059 P positive thymic T cell selection
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048814 P regulation of dendrite morphogenesis
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050772 P positive regulation of axonogenesis
GO:0050852 P T cell receptor signaling pathway
GO:0051055 P negative regulation of lipid biosynthetic process
GO:0051645 P Golgi localization
GO:0051896 P regulation of protein kinase B signaling
GO:0060070 P canonical Wnt signaling pathway
GO:0060770 P negative regulation of epithelial cell proliferation involved in prostate gland development
GO:0070062 C extracellular exosome
GO:0071493 P cellular response to UV-B
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:0097484 P dendrite extension
GO:1900182 P positive regulation of protein localization to nucleus
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1904262 P negative regulation of TORC1 signaling
previous next from show/32735

- SilkBase 1999-2023 -