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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3541 O_BomaASG13188_5prime_partial:A_BomaASG_c30113_g1_i1
109bp
3542 O_BomaASG13189_complete:A_BomaASG_c30113_g1_i1
103bp
3543 O_BomaASG1318_complete:A_BomaASG_c9179_g1_i1
671bp
bestrophin-4_isoform_X1_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0015698 P inorganic anion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034707 C chloride channel complex
GO:0043271 P negative regulation of ion transport
GO:1902476 P chloride transmembrane transport
3544 O_BomaASG13190_complete:A_BomaASG_c30114_g1_i1
664bp
transmembrane_protein_214_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005881 C cytoplasmic microtubule
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3545 O_BomaASG13191_complete:A_BomaASG_c30114_g1_i2
653bp
transmembrane_protein_214_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005881 C cytoplasmic microtubule
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3546 O_BomaASG13192_complete:A_BomaASG_c30114_g1_i3
211bp
transmembrane_protein_214_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005881 C cytoplasmic microtubule
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3547 O_BomaASG13193_5prime_partial:A_BomaASG_c30116_g1_i1
584bp
MAP7_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
3548 O_BomaASG13194_complete:A_BomaASG_c30116_g1_i1
156bp
3549 O_BomaASG13195_5prime_partial:A_BomaASG_c30116_g1_i1
110bp
3550 O_BomaASG13196_5prime_partial:A_BomaASG_c30116_g1_i1
103bp
3551 O_BomaASG13197_3prime_partial:A_BomaASG_c30119_g1_i1
189bp
probable_DNA_replication_complex_GINS_protein_PSF2_[Bombyx_mori]
GO:0000727 P double-strand break repair via break-induced replication
GO:0000811 C GINS complex
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0032508 P DNA duplex unwinding
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1902975 P mitotic DNA replication initiation
3552 O_BomaASG13198_5prime_partial:A_BomaASG_c30120_g1_i1
112bp
3553 O_BomaASG13199_complete:A_BomaASG_c30120_g1_i2
101bp
3554 O_BomaASG1319_complete:A_BomaASG_c9182_g1_i1
210bp
H+_transporting_ATP_synthase_O_subunit_isoform_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005756 C mitochondrial proton-transporting ATP synthase, central stalk
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0042776 P mitochondrial ATP synthesis coupled proton transport
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
3555 O_BomaASG131_complete:A_BomaASG_c801_g1_i2
368bp
beta-parvin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0030027 C lamellipodium
GO:0030031 P cell projection assembly
GO:0030032 P lamellipodium assembly
GO:0030054 C cell junction
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
GO:0071963 P establishment or maintenance of cell polarity regulating cell shape
3556 O_BomaASG13200_internal:A_BomaASG_c30122_g1_i1
301bp
argonaute_1_[Bombyx_mori]
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005844 C polysome
GO:0005845 C mRNA cap binding complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030154 P cell differentiation
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035068 C RISC complex
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035278 P miRNA-mediated gene silencing by inhibition of translation
GO:0035279 P miRNA-mediated gene silencing by mRNA destabilization
GO:0045947 P negative regulation of translational initiation
GO:0046872 F metal ion binding
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070551 F endoribonuclease activity, cleaving siRNA-paired mRNA
GO:0070578 C RISC-loading complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
3557 O_BomaASG13201_internal:A_BomaASG_c30122_g2_i1
179bp
protein_argonaute-2_isoform_X2_[Helicoverpa_armigera]
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005844 C polysome
GO:0005845 C mRNA cap binding complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030154 P cell differentiation
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035068 C RISC complex
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035278 P miRNA-mediated gene silencing by inhibition of translation
GO:0035279 P miRNA-mediated gene silencing by mRNA destabilization
GO:0045947 P negative regulation of translational initiation
GO:0046872 F metal ion binding
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070551 F endoribonuclease activity, cleaving siRNA-paired mRNA
GO:0070578 C RISC-loading complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
3558 O_BomaASG13202_internal:A_BomaASG_c30122_g2_i2
495bp
argonaute_1_[Bombyx_mori]
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005844 C polysome
GO:0005845 C mRNA cap binding complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030154 P cell differentiation
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035068 C RISC complex
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035278 P miRNA-mediated gene silencing by inhibition of translation
GO:0035279 P miRNA-mediated gene silencing by mRNA destabilization
GO:0045947 P negative regulation of translational initiation
GO:0046872 F metal ion binding
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070551 F endoribonuclease activity, cleaving siRNA-paired mRNA
GO:0070578 C RISC-loading complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
3559 O_BomaASG13203_5prime_partial:A_BomaASG_c30123_g1_i1
231bp
uncharacterized_protein_LOC101746773,_partial_[Bombyx_mori]
3560 O_BomaASG13204_5prime_partial:A_BomaASG_c30123_g1_i1
110bp
3561 O_BomaASG13205_3prime_partial:A_BomaASG_c30123_g1_i1
108bp
hypothetical_protein_KGM_201851_[Danaus_plexippus_plexippus]
3562 O_BomaASG13206_5prime_partial:A_BomaASG_c30123_g1_i1
102bp
3563 O_BomaASG13207_internal:A_BomaASG_c30124_g1_i1
220bp
spermatogenesis-associated_protein_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0007049 P cell cycle
GO:0010564 P regulation of cell cycle process
GO:0016887 F ATP hydrolysis activity
GO:0020011 C apicoplast
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0043130 F ubiquitin binding
3564 O_BomaASG13208_complete:A_BomaASG_c30127_g1_i2
830bp
perilipin-4_isoform_X5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
3565 O_BomaASG13209_complete:A_BomaASG_c30127_g1_i2
106bp
3566 O_BomaASG1320_5prime_partial:A_BomaASG_c9194_g1_i1
139bp
catenin_delta-2_isoform_X3_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007043 P cell-cell junction assembly
GO:0007155 P cell adhesion
GO:0007267 P cell-cell signaling
GO:0009898 C cytoplasmic side of plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030057 C desmosome
GO:0030155 P regulation of cell adhesion
GO:0030496 C midbody
GO:0032467 P positive regulation of cytokinesis
GO:0043547 P positive regulation of GTPase activity
GO:0044291 C cell-cell contact zone
GO:0048471 C perinuclear region of cytoplasm
GO:0051233 C spindle midzone
GO:0072686 C mitotic spindle
3567 O_BomaASG13210_complete:A_BomaASG_c30127_g1_i3
764bp
perilipin-4_isoform_X16_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
3568 O_BomaASG13211_complete:A_BomaASG_c30127_g1_i3
106bp
3569 O_BomaASG13212_complete:A_BomaASG_c30127_g1_i5
858bp
perilipin-4_isoform_X4_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
3570 O_BomaASG13213_complete:A_BomaASG_c30127_g1_i5
115bp
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