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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3481 O_BomaASG13133_complete:A_BomaASG_c30087_g1_i5
144bp
3482 O_BomaASG13134_complete:A_BomaASG_c30087_g1_i5
135bp
3483 O_BomaASG13135_complete:A_BomaASG_c30087_g1_i5
127bp
3484 O_BomaASG13136_complete:A_BomaASG_c30087_g1_i5
111bp
3485 O_BomaASG13137_complete:A_BomaASG_c30088_g1_i1
100bp
3486 O_BomaASG13138_5prime_partial:A_BomaASG_c30088_g1_i2
113bp
3487 O_BomaASG13139_complete:A_BomaASG_c30088_g1_i2
100bp
3488 O_BomaASG1313_complete:A_BomaASG_c9173_g1_i1
112bp
3489 O_BomaASG13140_3prime_partial:A_BomaASG_c30089_g1_i1
766bp
serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
3490 O_BomaASG13141_3prime_partial:A_BomaASG_c30089_g1_i2
775bp
serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
3491 O_BomaASG13142_3prime_partial:A_BomaASG_c30089_g1_i3
775bp
serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
3492 O_BomaASG13143_complete:A_BomaASG_c30090_g2_i1
902bp
ubiquitin-protein_ligase_E3A_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0001541 P ovarian follicle development
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007420 P brain development
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031398 P positive regulation of protein ubiquitination
GO:0035037 P sperm entry
GO:0042752 P regulation of circadian rhythm
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051865 P protein autoubiquitination
GO:0060736 P prostate gland growth
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:2000058 P regulation of ubiquitin-dependent protein catabolic process
3493 O_BomaASG13144_3prime_partial:A_BomaASG_c30090_g2_i2
285bp
ubiquitin-protein_ligase_E3A_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0001541 P ovarian follicle development
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031398 P positive regulation of protein ubiquitination
GO:0035037 P sperm entry
GO:0042752 P regulation of circadian rhythm
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051865 P protein autoubiquitination
GO:0060736 P prostate gland growth
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:2000058 P regulation of ubiquitin-dependent protein catabolic process
3494 O_BomaASG13145_5prime_partial:A_BomaASG_c30091_g1_i1
227bp
short-chain_dehydrogenease/reductase-like_[Bombyx_mori]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
3495 O_BomaASG13146_complete:A_BomaASG_c30091_g1_i2
260bp
short-chain_dehydrogenease/reductase-like_[Bombyx_mori]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
3496 O_BomaASG13147_complete:A_BomaASG_c30091_g2_i1
258bp
uncharacterized_protein_LOC110373703_[Helicoverpa_armigera]
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030497 P fatty acid elongation
GO:0050661 F NADP binding
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
3497 O_BomaASG13148_3prime_partial:A_BomaASG_c30093_g1_i2
196bp
transcriptional_adapter_2A_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005694 C chromosome
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007067 P mitotic cell cycle
GO:0016573 P histone acetylation
GO:0031063 P regulation of histone deacetylation
GO:0031647 P regulation of protein stability
GO:0035066 P positive regulation of histone acetylation
GO:0070461 C SAGA-type complex
GO:0072686 C mitotic spindle
GO:0090043 P regulation of tubulin deacetylation
3498 O_BomaASG13149_internal:A_BomaASG_c30093_g1_i3
188bp
transcriptional_adapter_2A_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070461 C SAGA-type complex
3499 O_BomaASG1314_complete:A_BomaASG_c9175_g1_i1
245bp
uncharacterized_protein_LOC101740193_isoform_X1_[Bombyx_mori]
3500 O_BomaASG13150_internal:A_BomaASG_c30093_g1_i4
107bp
transcriptional_adapter_2A_[Bombyx_mori]
3501 O_BomaASG13151_internal:A_BomaASG_c30093_g2_i1
212bp
transcriptional_adapter_2A_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070461 C SAGA-type complex
3502 O_BomaASG13152_complete:A_BomaASG_c30095_g1_i1
306bp
nucleocapsid_protein_[Hubei_earwig_virus_1]
3503 O_BomaASG13153_3prime_partial:A_BomaASG_c30096_g1_i1
235bp
uncharacterized_protein_LOC110385079_[Bombyx_mori]
3504 O_BomaASG13154_3prime_partial:A_BomaASG_c30096_g1_i2
235bp
uncharacterized_protein_LOC110385079_[Bombyx_mori]
3505 O_BomaASG13155_internal:A_BomaASG_c30097_g1_i1
452bp
transient_receptor_potential_cation_channel_trpm_isoform_X6_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007005 P mitochondrion organization
GO:0010960 P magnesium ion homeostasis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0034220 P ion transmembrane transport
GO:0034703 C cation channel complex
GO:0043052 P thermotaxis
GO:0046873 F metal ion transmembrane transporter activity
GO:0051262 P protein tetramerization
GO:0055069 P zinc ion homeostasis
GO:0055085 P transmembrane transport
GO:0070838 P metal ion transport
GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
GO:0098655 P cation transmembrane transport
3506 O_BomaASG13156_complete:A_BomaASG_c30098_g1_i1
145bp
uncharacterized_protein_LOC101742906_isoform_X1_[Bombyx_mori]
3507 O_BomaASG13157_complete:A_BomaASG_c30098_g1_i1
138bp
3508 O_BomaASG13158_complete:A_BomaASG_c30098_g1_i3
167bp
3509 O_BomaASG13159_complete:A_BomaASG_c30098_g1_i3
114bp
uncharacterized_protein_LOC101742906_isoform_X3_[Bombyx_mori]
3510 O_BomaASG1315_complete:A_BomaASG_c9176_g1_i1
672bp
leukotriene_A-4_hydrolase_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0004301 F epoxide hydrolase activity
GO:0004463 F leukotriene-A4 hydrolase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0019370 P leukotriene biosynthetic process
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070062 C extracellular exosome
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