Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3091	O_BomaASG12783_3prime_partial:A_BomaASG_c29921_g1_i5 249bp
3092	O_BomaASG12784_5prime_partial:A_BomaASG_c29921_g1_i6 249bp
3093	O_BomaASG12785_3prime_partial:A_BomaASG_c29921_g1_i6 246bp
3094	O_BomaASG12786_3prime_partial:A_BomaASG_c29921_g1_i6 161bp		ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
3095	O_BomaASG12787_complete:A_BomaASG_c29922_g1_i1 118bp		GSK3-beta_interaction_protein_isoform_X1_[Bombyx_mori]	GO:0005737 C cytoplasm
3096	O_BomaASG12788_5prime_partial:A_BomaASG_c29923_g1_i1 341bp		uncharacterized_protein_LOC101745200_[Bombyx_mori]
3097	O_BomaASG12789_3prime_partial:A_BomaASG_c29924_g1_i1 275bp		zinc_finger_protein_57_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
3098	O_BomaASG1278_internal:A_BomaASG_c9104_g1_i1 191bp
3099	O_BomaASG12790_complete:A_BomaASG_c29924_g1_i1 132bp
3100	O_BomaASG12791_3prime_partial:A_BomaASG_c29924_g1_i2 275bp		zinc_finger_protein_57_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
3101	O_BomaASG12792_complete:A_BomaASG_c29924_g1_i2 271bp		uncharacterized_protein_LOC101735822_[Bombyx_mori]
3102	O_BomaASG12793_complete:A_BomaASG_c29924_g1_i2 132bp
3103	O_BomaASG12794_3prime_partial:A_BomaASG_c29925_g1_i1 446bp		uncharacterized_protein_LOC101738149_[Bombyx_mori]	GO:0004222 F metalloendopeptidase activity GO:0005515 F protein binding GO:0005654 C nucleoplasm GO:0005739 C mitochondrion GO:0005886 C plasma membrane GO:0006508 P proteolysis GO:0007155 P cell adhesion GO:0007173 P epidermal growth factor receptor signaling pathway GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0017124 F SH3 domain binding GO:0046872 F metal ion binding
3104	O_BomaASG12795_complete:A_BomaASG_c29925_g1_i1 144bp
3105	O_BomaASG12796_3prime_partial:A_BomaASG_c29927_g1_i1 194bp		DNA_excision_repair_protein_ERCC-6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000303 P response to superoxide GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0003682 F chromatin binding GO:0004386 F helicase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005730 C nucleolus GO:0006281 P DNA repair GO:0006283 P transcription-coupled nucleotide-excision repair GO:0006284 P base-excision repair GO:0006290 P pyrimidine dimer repair GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006362 P transcription elongation from RNA polymerase I promoter GO:0006366 P transcription by RNA polymerase II GO:0006974 P cellular response to DNA damage stimulus GO:0006979 P response to oxidative stress GO:0007256 P obsolete activation of JNKK activity GO:0007257 P obsolete activation of JUN kinase activity GO:0008022 F protein C-terminus binding GO:0008023 C transcription elongation factor complex GO:0008094 F ATP-dependent activity, acting on DNA GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage GO:0009411 P response to UV GO:0009636 P response to toxic substance GO:0010165 P response to X-ray GO:0010224 P response to UV-B GO:0010332 P response to gamma radiation GO:0016787 F hydrolase activity GO:0030296 F protein tyrosine kinase activator activity GO:0032403 F protein-containing complex binding GO:0032784 P regulation of DNA-templated transcription, elongation GO:0032786 P positive regulation of DNA-templated transcription, elongation GO:0035264 P multicellular organism growth GO:0045494 P photoreceptor cell maintenance GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation GO:0047485 F protein N-terminus binding GO:0061098 P positive regulation of protein tyrosine kinase activity
3106	O_BomaASG12797_internal:A_BomaASG_c29929_g1_i1 324bp		saccharopine_dehydrogenase-like_oxidoreductase_[Bombyx_mori]	GO:0016491 F oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
3107	O_BomaASG12798_5prime_partial:A_BomaASG_c29929_g1_i1 120bp
3108	O_BomaASG12799_5prime_partial:A_BomaASG_c29929_g1_i1 105bp
3109	O_BomaASG1279_5prime_partial:A_BomaASG_c9104_g1_i1 128bp
3110	O_BomaASG127_5prime_partial:A_BomaASG_c792_g1_i1 167bp
3111	O_BomaASG12800_internal:A_BomaASG_c29929_g1_i2 227bp		saccharopine_dehydrogenase-like_oxidoreductase_[Bombyx_mori]	GO:0016491 F oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
3112	O_BomaASG12801_5prime_partial:A_BomaASG_c29929_g1_i2 120bp
3113	O_BomaASG12802_5prime_partial:A_BomaASG_c29929_g1_i2 105bp
3114	O_BomaASG12803_internal:A_BomaASG_c29929_g1_i3 283bp		saccharopine_dehydrogenase-like_oxidoreductase_[Bombyx_mori]	GO:0016491 F oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
3115	O_BomaASG12804_5prime_partial:A_BomaASG_c29929_g1_i3 120bp
3116	O_BomaASG12805_5prime_partial:A_BomaASG_c29929_g1_i3 105bp
3117	O_BomaASG12806_complete:A_BomaASG_c29931_g1_i1 307bp		microvitellogenin_[Bombyx_mori]	GO:0005576 C extracellular region
3118	O_BomaASG12807_complete:A_BomaASG_c29931_g1_i2 307bp		microvitellogenin_[Bombyx_mori]	GO:0005576 C extracellular region
3119	O_BomaASG12808_complete:A_BomaASG_c29934_g1_i1 424bp		uncharacterized_protein_LOC101735790_[Bombyx_mori]
3120	O_BomaASG12809_complete:A_BomaASG_c29934_g1_i2 424bp		uncharacterized_protein_LOC101735790_[Bombyx_mori]